Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SNORD114-11-201ENST00000363738 75 ntBASIC0.14□□□□□ -2.39
PTCD1O75127 Y_RNA.189-201ENST00000363959 112 ntBASIC0.14□□□□□ -2.39
PTCD1O75127 RNA5SP285-201ENST00000516619 119 ntBASIC0.14□□□□□ -2.39
PTCD1O75127 RNY1P9-201ENST00000532431 109 ntBASIC0.14□□□□□ -2.39
PTCD1O75127 MIR3179-1-201ENST00000578940 84 ntBASIC0.14□□□□□ -2.39
PTCD1O75127 MIR3179-2-201ENST00000579107 84 ntBASIC0.14□□□□□ -2.39
PTCD1O75127 MIR3179-3-201ENST00000579566 84 ntBASIC0.14□□□□□ -2.39
PTCD1O75127 MIR3179-4-201ENST00000617599 84 ntBASIC0.14□□□□□ -2.39
PTCD1O75127 MIR4645-201ENST00000583158 77 ntBASIC0.13□□□□□ -2.39
PTCD1O75127 RNU6-563P-201ENST00000364872 108 ntBASIC0.12□□□□□ -2.39
PTCD1O75127 MIR548N-201ENST00000408742 75 ntBASIC0.12□□□□□ -2.39
PTCD1O75127 Y_RNA.603-201ENST00000410571 108 ntBASIC0.12□□□□□ -2.39
PTCD1O75127 MIR4290-201ENST00000583807 95 ntBASIC0.12□□□□□ -2.39
PTCD1O75127 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.12□□□□□ -2.39
PTCD1O75127 SNORD114-12-201ENST00000365400 75 ntBASIC0.1□□□□□ -2.39
PTCD1O75127 AC090616.4-201ENST00000448026 115 ntBASIC0.1□□□□□ -2.39
PTCD1O75127 RNU6-68P-201ENST00000516576 104 ntBASIC0.09□□□□□ -2.4
PTCD1O75127 U6.97-201ENST00000636904 101 ntBASIC0.08□□□□□ -2.4
PTCD1O75127 MIR6759-201ENST00000638110 65 ntBASIC0.08□□□□□ -2.4
PTCD1O75127 RNA5SP26-201ENST00000362406 119 ntBASIC0.07□□□□□ -2.4
PTCD1O75127 Y_RNA.223-201ENST00000364290 113 ntBASIC0.07□□□□□ -2.4
PTCD1O75127 SNORD60-201ENST00000383903 83 ntBASIC0.07□□□□□ -2.4
PTCD1O75127 Y_RNA.320-201ENST00000365144 102 ntBASIC0.06□□□□□ -2.4
PTCD1O75127 RNU6-485P-201ENST00000363475 107 ntBASIC0.05□□□□□ -2.4
PTCD1O75127 MIR204-201ENST00000385200 110 ntBASIC0.05□□□□□ -2.4
PTCD1O75127 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
PTCD1O75127 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
PTCD1O75127 Y_RNA.382-201ENST00000365672 114 ntBASIC0.04□□□□□ -2.4
PTCD1O75127 MIR4788-201ENST00000639104 80 ntBASIC0.04□□□□□ -2.4
PTCD1O75127 RNU6-176P-201ENST00000517196 105 ntBASIC0.03□□□□□ -2.4
PTCD1O75127 AC120024.2-201ENST00000576526 175 ntBASIC0.03□□□□□ -2.4
PTCD1O75127 RNU6-894P-201ENST00000517094 105 ntBASIC0.02□□□□□ -2.41
PTCD1O75127 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
PTCD1O75127 RNA5SP476-201ENST00000516613 103 ntBASIC0.01□□□□□ -2.41
PTCD1O75127 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.01□□□□□ -2.41
PTCD1O75127 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0□□□□□ -2.41
PTCD1O75127 AC104692.1-201ENST00000472406 90 ntBASIC0□□□□□ -2.41
PTCD1O75127 MIR4263-201ENST00000584745 83 ntBASIC0□□□□□ -2.41
PTCD1O75127 MIR3666-201ENST00000607845 111 ntBASIC0□□□□□ -2.41
PTCD1O75127 SNORA18.1-201ENST00000363418 128 ntBASIC-0.01□□□□□ -2.41
PTCD1O75127 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
PTCD1O75127 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.02□□□□□ -2.41
PTCD1O75127 RNA5SP300-201ENST00000391197 107 ntBASIC-0.03□□□□□ -2.41
PTCD1O75127 SNORD115.2-201ENST00000391126 59 ntBASIC-0.04□□□□□ -2.42
PTCD1O75127 SNORA13-201ENST00000458790 133 ntBASIC-0.05□□□□□ -2.42
PTCD1O75127 SNORD4A-201ENST00000459174 72 ntBASIC-0.05□□□□□ -2.42
PTCD1O75127 RNA5SP67-201ENST00000516422 131 ntBASIC-0.05□□□□□ -2.42
PTCD1O75127 SNORA32.1-201ENST00000364514 115 ntBASIC-0.06□□□□□ -2.42
PTCD1O75127 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
PTCD1O75127 MIR4802-201ENST00000581881 80 ntBASIC-0.06□□□□□ -2.42
PTCD1O75127 RNU6-431P-201ENST00000383874 107 ntBASIC-0.07□□□□□ -2.42
PTCD1O75127 RNU6-695P-201ENST00000391157 104 ntBASIC-0.07□□□□□ -2.42
PTCD1O75127 MIR4636-201ENST00000582271 80 ntBASIC-0.07□□□□□ -2.42
PTCD1O75127 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.09□□□□□ -2.42
PTCD1O75127 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.09□□□□□ -2.42
PTCD1O75127 RNU6-133P-201ENST00000383989 107 ntBASIC-0.1□□□□□ -2.43
PTCD1O75127 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.1□□□□□ -2.43
PTCD1O75127 MIR23C-201ENST00000579846 100 ntBASIC-0.1□□□□□ -2.43
PTCD1O75127 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
PTCD1O75127 MIR147A-201ENST00000385079 72 ntBASIC-0.12□□□□□ -2.43
PTCD1O75127 SNORD64-201ENST00000386683 67 ntBASIC-0.12□□□□□ -2.43
PTCD1O75127 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
PTCD1O75127 MIR4436A-201ENST00000585278 85 ntBASIC-0.12□□□□□ -2.43
PTCD1O75127 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.13□□□□□ -2.43
PTCD1O75127 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.13□□□□□ -2.43
PTCD1O75127 MIR5589-201ENST00000579442 60 ntBASIC-0.13□□□□□ -2.43
PTCD1O75127 Z95118.1-201ENST00000421372 247 ntBASIC-0.14□□□□□ -2.43
PTCD1O75127 RNU7-134P-201ENST00000458997 64 ntBASIC-0.14□□□□□ -2.43
PTCD1O75127 HAR1A.1-201ENST00000459583 118 ntBASIC-0.14□□□□□ -2.43
PTCD1O75127 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.15□□□□□ -2.43
PTCD1O75127 MIR6086-201ENST00000638065 55 ntBASIC-0.15□□□□□ -2.43
PTCD1O75127 MIR6818-201ENST00000621576 65 ntBASIC-0.16□□□□□ -2.44
PTCD1O75127 RNU6-912P-201ENST00000363800 104 ntBASIC-0.17□□□□□ -2.44
PTCD1O75127 SNORA3B-201ENST00000391305 131 ntBASIC-0.17□□□□□ -2.44
PTCD1O75127 SNORD18C-201ENST00000362704 69 ntBASIC-0.18□□□□□ -2.44
PTCD1O75127 AC021146.6-201ENST00000514659 117 ntBASIC-0.18□□□□□ -2.44
PTCD1O75127 RNA5SP224-201ENST00000365069 126 ntBASIC-0.19□□□□□ -2.44
PTCD1O75127 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.19□□□□□ -2.44
PTCD1O75127 RNU6-836P-201ENST00000362920 107 ntBASIC-0.2□□□□□ -2.44
PTCD1O75127 AC018880.2-201ENST00000414265 201 ntBASIC-0.2□□□□□ -2.44
PTCD1O75127 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.21□□□□□ -2.44
PTCD1O75127 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.21□□□□□ -2.44
PTCD1O75127 MIR379-201ENST00000362218 67 ntBASIC-0.22□□□□□ -2.44
PTCD1O75127 RNU6-79P-201ENST00000362511 107 ntBASIC-0.22□□□□□ -2.44
PTCD1O75127 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.22□□□□□ -2.44
PTCD1O75127 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.22□□□□□ -2.44
PTCD1O75127 FTX_4.1-201ENST00000616291 147 ntBASIC-0.22□□□□□ -2.44
PTCD1O75127 MIR382-201ENST00000637119 76 ntBASIC-0.22□□□□□ -2.44
PTCD1O75127 MIR196A2-201ENST00000385189 110 ntBASIC-0.23□□□□□ -2.45
PTCD1O75127 SNORD114-25-201ENST00000363742 72 ntBASIC-0.25□□□□□ -2.45
PTCD1O75127 SNORD114-31-201ENST00000363219 75 ntBASIC-0.26□□□□□ -2.45
PTCD1O75127 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.27□□□□□ -2.45
PTCD1O75127 MIR214-201ENST00000385214 110 ntBASIC-0.27□□□□□ -2.45
PTCD1O75127 IGLVI-20-201ENST00000519296 130 ntBASIC-0.27□□□□□ -2.45
PTCD1O75127 RNU6-164P-201ENST00000364604 103 ntBASIC-0.28□□□□□ -2.45
PTCD1O75127 MIR6874-201ENST00000635894 71 ntBASIC-0.28□□□□□ -2.45
PTCD1O75127 RNU6-284P-201ENST00000411105 106 ntBASIC-0.29□□□□□ -2.46
PTCD1O75127 SNORD126-201ENST00000459475 77 ntBASIC-0.29□□□□□ -2.46
PTCD1O75127 SNORD114-14-201ENST00000362723 75 ntBASIC-0.3□□□□□ -2.46
PTCD1O75127 SNORD45C-201ENST00000383893 79 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms