Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 Y_RNA.406-201ENST00000383984 100 ntBASIC0.5□□□□□ -2.33
H3BM21 RNU6-929P-201ENST00000384429 107 ntBASIC0.5□□□□□ -2.33
H3BM21 RNU6-695P-201ENST00000391157 104 ntBASIC0.5□□□□□ -2.33
H3BM21 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
H3BM21 AC090616.4-201ENST00000448026 115 ntBASIC0.49□□□□□ -2.33
H3BM21 SNORD18C-201ENST00000362704 69 ntBASIC0.48□□□□□ -2.33
H3BM21 MIR4743-201ENST00000584576 69 ntBASIC0.48□□□□□ -2.33
H3BM21 FTX_4.1-201ENST00000616291 147 ntBASIC0.48□□□□□ -2.33
H3BM21 SNORD49B-201ENST00000365172 72 ntBASIC0.47□□□□□ -2.33
H3BM21 MIR145-201ENST00000384967 88 ntBASIC0.47□□□□□ -2.33
H3BM21 AP000533.3-201ENST00000447704 118 ntBASIC0.47□□□□□ -2.33
H3BM21 RNA5SP66-201ENST00000517178 101 ntBASIC0.47□□□□□ -2.33
H3BM21 RNU6-1169P-201ENST00000363537 103 ntBASIC0.46□□□□□ -2.34
H3BM21 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
H3BM21 Y_RNA.335-201ENST00000365299 96 ntBASIC0.45□□□□□ -2.34
H3BM21 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
H3BM21 SNORD45C-201ENST00000383893 79 ntBASIC0.45□□□□□ -2.34
H3BM21 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
H3BM21 MIR4315-1-201ENST00000636800 73 ntBASIC0.45□□□□□ -2.34
H3BM21 AC093726.3-201ENST00000637588 150 ntBASIC0.45□□□□□ -2.34
H3BM21 MIR4315-2-201ENST00000640925 73 ntBASIC0.45□□□□□ -2.34
H3BM21 RNU6-1327P-201ENST00000365302 105 ntBASIC0.44□□□□□ -2.34
H3BM21 HAR1A.1-201ENST00000459583 118 ntBASIC0.44□□□□□ -2.34
H3BM21 MIR3179-1-201ENST00000578940 84 ntBASIC0.43□□□□□ -2.34
H3BM21 MIR3179-2-201ENST00000579107 84 ntBASIC0.43□□□□□ -2.34
H3BM21 MIR3179-3-201ENST00000579566 84 ntBASIC0.43□□□□□ -2.34
H3BM21 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
H3BM21 MIR3179-4-201ENST00000617599 84 ntBASIC0.43□□□□□ -2.34
H3BM21 SNORA62.5-201ENST00000516634 120 ntBASIC0.42□□□□□ -2.34
H3BM21 RNU6-912P-201ENST00000363800 104 ntBASIC0.41□□□□□ -2.34
H3BM21 Y_RNA.189-201ENST00000363959 112 ntBASIC0.41□□□□□ -2.34
H3BM21 RNU6-46P-201ENST00000383860 107 ntBASIC0.41□□□□□ -2.34
H3BM21 MIR4645-201ENST00000583158 77 ntBASIC0.41□□□□□ -2.34
H3BM21 Y_RNA.781-201ENST00000620301 103 ntBASIC0.41□□□□□ -2.34
H3BM21 AL590491.3-201ENST00000610731 82 ntBASIC0.4□□□□□ -2.35
H3BM21 SNORD114-5-201ENST00000362928 70 ntBASIC0.39□□□□□ -2.35
H3BM21 RNA5SP214-201ENST00000363378 118 ntBASIC0.39□□□□□ -2.35
H3BM21 RNA5SP63-201ENST00000391225 112 ntBASIC0.39□□□□□ -2.35
H3BM21 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
H3BM21 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.39□□□□□ -2.35
H3BM21 RNA5SP26-201ENST00000362406 119 ntBASIC0.38□□□□□ -2.35
H3BM21 SNORA32.1-201ENST00000364514 115 ntBASIC0.38□□□□□ -2.35
H3BM21 MIR204-201ENST00000385200 110 ntBASIC0.37□□□□□ -2.35
H3BM21 RNA5SP285-201ENST00000516619 119 ntBASIC0.37□□□□□ -2.35
H3BM21 SNORA13-201ENST00000458790 133 ntBASIC0.36□□□□□ -2.35
H3BM21 MIR6086-201ENST00000638065 55 ntBASIC0.34□□□□□ -2.36
H3BM21 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
H3BM21 SNORD114-9-201ENST00000364370 72 ntBASIC0.32□□□□□ -2.36
H3BM21 MIR4263-201ENST00000584745 83 ntBASIC0.31□□□□□ -2.36
H3BM21 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.31□□□□□ -2.36
H3BM21 MIR656-201ENST00000385224 78 ntBASIC0.29□□□□□ -2.36
H3BM21 AC018880.2-201ENST00000414265 201 ntBASIC0.29□□□□□ -2.36
H3BM21 MIR6718-201ENST00000616153 80 ntBASIC0.29□□□□□ -2.36
H3BM21 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.28□□□□□ -2.36
H3BM21 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.28□□□□□ -2.36
H3BM21 MIR6759-201ENST00000638110 65 ntBASIC0.28□□□□□ -2.36
H3BM21 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
H3BM21 SNORD114-11-201ENST00000363738 75 ntBASIC0.24□□□□□ -2.37
H3BM21 SNORD114-12-201ENST00000365400 75 ntBASIC0.24□□□□□ -2.37
H3BM21 MIR1254-1-201ENST00000408257 97 ntBASIC0.24□□□□□ -2.37
H3BM21 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
H3BM21 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.24□□□□□ -2.37
H3BM21 AC104692.1-201ENST00000472406 90 ntBASIC0.23□□□□□ -2.37
H3BM21 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
H3BM21 RNU6-1324P-201ENST00000384222 107 ntBASIC0.22□□□□□ -2.37
H3BM21 RNU6-345P-201ENST00000517001 107 ntBASIC0.22□□□□□ -2.37
H3BM21 MIR5190-201ENST00000581537 80 ntBASIC0.22□□□□□ -2.37
H3BM21 MIR4636-201ENST00000582271 80 ntBASIC0.22□□□□□ -2.37
H3BM21 MIR4788-201ENST00000639104 80 ntBASIC0.22□□□□□ -2.37
H3BM21 Z95118.1-201ENST00000421372 247 ntBASIC0.21□□□□□ -2.38
H3BM21 AL500527.2-201ENST00000454105 95 ntBASIC0.21□□□□□ -2.38
H3BM21 MIR3666-201ENST00000607845 111 ntBASIC0.2□□□□□ -2.38
H3BM21 RNU6-79P-201ENST00000362511 107 ntBASIC0.18□□□□□ -2.38
H3BM21 RNU6-1340P-201ENST00000384438 107 ntBASIC0.18□□□□□ -2.38
H3BM21 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.18□□□□□ -2.38
H3BM21 MIR4802-201ENST00000581881 80 ntBASIC0.18□□□□□ -2.38
H3BM21 SNORA18.1-201ENST00000363418 128 ntBASIC0.17□□□□□ -2.38
H3BM21 Y_RNA.434-201ENST00000384090 100 ntBASIC0.17□□□□□ -2.38
H3BM21 MIR5589-201ENST00000579442 60 ntBASIC0.17□□□□□ -2.38
H3BM21 MIR4290-201ENST00000583807 95 ntBASIC0.16□□□□□ -2.38
H3BM21 MIR6818-201ENST00000621576 65 ntBASIC0.16□□□□□ -2.38
H3BM21 Y_RNA.484-201ENST00000384389 103 ntBASIC0.15□□□□□ -2.39
H3BM21 MIR147A-201ENST00000385079 72 ntBASIC0.15□□□□□ -2.39
H3BM21 RNU6-284P-201ENST00000411105 106 ntBASIC0.15□□□□□ -2.39
H3BM21 AC021146.6-201ENST00000514659 117 ntBASIC0.15□□□□□ -2.39
H3BM21 SNORD19B.1-201ENST00000630615 80 ntBASIC0.15□□□□□ -2.39
H3BM21 RNU6-164P-201ENST00000364604 103 ntBASIC0.13□□□□□ -2.39
H3BM21 MIR1295B-201ENST00000636144 60 ntBASIC0.13□□□□□ -2.39
H3BM21 RNU6-431P-201ENST00000383874 107 ntBASIC0.12□□□□□ -2.39
H3BM21 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
H3BM21 RNA5SP300-201ENST00000391197 107 ntBASIC0.11□□□□□ -2.39
H3BM21 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
H3BM21 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
H3BM21 Y_RNA.185-201ENST00000363894 100 ntBASIC0.09□□□□□ -2.4
H3BM21 MIR548H1-201ENST00000408610 102 ntBASIC0.09□□□□□ -2.4
H3BM21 SNORD4A-201ENST00000459174 72 ntBASIC0.09□□□□□ -2.4
H3BM21 AL627230.5-201ENST00000619807 58 ntBASIC0.09□□□□□ -2.4
H3BM21 RNU6-1034P-201ENST00000365335 101 ntBASIC0.08□□□□□ -2.4
H3BM21 Y_RNA.349-201ENST00000365406 102 ntBASIC0.08□□□□□ -2.4
H3BM21 RNU6-620P-201ENST00000384017 96 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms