Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.86□□□□□ -2.27
DNMT3AQ9Y6K1 RNA5SP325-201ENST00000363756 130 ntBASIC0.85□□□□□ -2.27
DNMT3AQ9Y6K1 SNORA26.4-201ENST00000391188 123 ntBASIC0.85□□□□□ -2.27
DNMT3AQ9Y6K1 MIR1197-201ENST00000408818 88 ntBASIC0.85□□□□□ -2.27
DNMT3AQ9Y6K1 MIR6514-201ENST00000622549 70 ntBASIC0.85□□□□□ -2.27
DNMT3AQ9Y6K1 Y_RNA.129-201ENST00000363392 110 ntBASIC0.84□□□□□ -2.27
DNMT3AQ9Y6K1 RNU6-901P-201ENST00000384593 106 ntBASIC0.84□□□□□ -2.27
DNMT3AQ9Y6K1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.84□□□□□ -2.27
DNMT3AQ9Y6K1 RNU6-1169P-201ENST00000363537 103 ntBASIC0.83□□□□□ -2.28
DNMT3AQ9Y6K1 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
DNMT3AQ9Y6K1 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
DNMT3AQ9Y6K1 uc_338.17-201ENST00000619633 179 ntBASIC0.83□□□□□ -2.28
DNMT3AQ9Y6K1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
DNMT3AQ9Y6K1 SNORD44.1-201ENST00000363202 61 ntBASIC0.82□□□□□ -2.28
DNMT3AQ9Y6K1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.82□□□□□ -2.28
DNMT3AQ9Y6K1 MIR6779-201ENST00000617283 64 ntBASIC0.82□□□□□ -2.28
DNMT3AQ9Y6K1 RNU6-563P-201ENST00000364872 108 ntBASIC0.81□□□□□ -2.28
DNMT3AQ9Y6K1 MIR548AJ2-201ENST00000408539 92 ntBASIC0.81□□□□□ -2.28
DNMT3AQ9Y6K1 FTX_4.1-201ENST00000616291 147 ntBASIC0.81□□□□□ -2.28
DNMT3AQ9Y6K1 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
DNMT3AQ9Y6K1 SNORD45C-201ENST00000383893 79 ntBASIC0.8□□□□□ -2.28
DNMT3AQ9Y6K1 RNU6-127P-201ENST00000390897 107 ntBASIC0.8□□□□□ -2.28
DNMT3AQ9Y6K1 AL445193.1-201ENST00000441183 141 ntBASIC0.8□□□□□ -2.28
DNMT3AQ9Y6K1 RNA5SP121-201ENST00000516537 101 ntBASIC0.8□□□□□ -2.28
DNMT3AQ9Y6K1 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
DNMT3AQ9Y6K1 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
DNMT3AQ9Y6K1 MIR5087-201ENST00000635826 76 ntBASIC0.8□□□□□ -2.28
DNMT3AQ9Y6K1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
DNMT3AQ9Y6K1 Y_RNA.603-201ENST00000410571 108 ntBASIC0.79□□□□□ -2.28
DNMT3AQ9Y6K1 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
DNMT3AQ9Y6K1 RNU6-695P-201ENST00000391157 104 ntBASIC0.78□□□□□ -2.28
DNMT3AQ9Y6K1 SNORD18.2-201ENST00000459604 70 ntBASIC0.78□□□□□ -2.28
DNMT3AQ9Y6K1 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
DNMT3AQ9Y6K1 SNORD115-33-201ENST00000363723 82 ntBASIC0.76□□□□□ -2.29
DNMT3AQ9Y6K1 MIR216A-201ENST00000385063 110 ntBASIC0.76□□□□□ -2.29
DNMT3AQ9Y6K1 MIR507-201ENST00000385234 94 ntBASIC0.76□□□□□ -2.29
DNMT3AQ9Y6K1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
DNMT3AQ9Y6K1 RNA5SP436-201ENST00000516020 115 ntBASIC0.76□□□□□ -2.29
DNMT3AQ9Y6K1 Y_RNA.335-201ENST00000365299 96 ntBASIC0.75□□□□□ -2.29
DNMT3AQ9Y6K1 RNA5SP163-201ENST00000410304 99 ntBASIC0.75□□□□□ -2.29
DNMT3AQ9Y6K1 CYP3A137P-201ENST00000562436 69 ntBASIC0.75□□□□□ -2.29
DNMT3AQ9Y6K1 RNU6-929P-201ENST00000384429 107 ntBASIC0.74□□□□□ -2.29
DNMT3AQ9Y6K1 CR383656.4-201ENST00000546909 122 ntBASIC0.74□□□□□ -2.29
DNMT3AQ9Y6K1 AC120024.2-201ENST00000576526 175 ntBASIC0.74□□□□□ -2.29
DNMT3AQ9Y6K1 RN7SL793P-201ENST00000583259 296 ntBASIC0.74□□□□□ -2.29
DNMT3AQ9Y6K1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.74□□□□□ -2.29
DNMT3AQ9Y6K1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
DNMT3AQ9Y6K1 AC244250.2-201ENST00000418731 148 ntBASIC0.73□□□□□ -2.29
DNMT3AQ9Y6K1 SNORD38.3-201ENST00000516599 73 ntBASIC0.73□□□□□ -2.29
DNMT3AQ9Y6K1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.73□□□□□ -2.29
DNMT3AQ9Y6K1 MIR4280-201ENST00000582178 76 ntBASIC0.73□□□□□ -2.29
DNMT3AQ9Y6K1 MIR103A1-201ENST00000362165 78 ntBASIC0.72□□□□□ -2.29
DNMT3AQ9Y6K1 MIR379-201ENST00000362218 67 ntBASIC0.72□□□□□ -2.29
DNMT3AQ9Y6K1 RNU6-912P-201ENST00000363800 104 ntBASIC0.72□□□□□ -2.29
DNMT3AQ9Y6K1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
DNMT3AQ9Y6K1 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
DNMT3AQ9Y6K1 MIR548H2-201ENST00000408874 88 ntBASIC0.7□□□□□ -2.3
DNMT3AQ9Y6K1 MIR148A-201ENST00000362215 68 ntBASIC0.69□□□□□ -2.3
DNMT3AQ9Y6K1 SNORD114-17-201ENST00000364699 75 ntBASIC0.69□□□□□ -2.3
DNMT3AQ9Y6K1 RNU6-815P-201ENST00000384080 113 ntBASIC0.69□□□□□ -2.3
DNMT3AQ9Y6K1 AC090616.4-201ENST00000448026 115 ntBASIC0.68□□□□□ -2.3
DNMT3AQ9Y6K1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
DNMT3AQ9Y6K1 SNORA68.3-201ENST00000515906 83 ntBASIC0.67□□□□□ -2.3
DNMT3AQ9Y6K1 RNU6-180P-201ENST00000516697 61 ntBASIC0.67□□□□□ -2.3
DNMT3AQ9Y6K1 SNORD18C-201ENST00000362704 69 ntBASIC0.66□□□□□ -2.3
DNMT3AQ9Y6K1 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
DNMT3AQ9Y6K1 MIR6851-201ENST00000617060 67 ntBASIC0.66□□□□□ -2.3
DNMT3AQ9Y6K1 MIRLET7D-201ENST00000362263 87 ntBASIC0.65□□□□□ -2.31
DNMT3AQ9Y6K1 MIR193B-201ENST00000384907 83 ntBASIC0.65□□□□□ -2.31
DNMT3AQ9Y6K1 SNORD22.1-201ENST00000516331 125 ntBASIC0.65□□□□□ -2.31
DNMT3AQ9Y6K1 AC090625.1-201ENST00000357130 210 ntBASIC0.64□□□□□ -2.31
DNMT3AQ9Y6K1 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
DNMT3AQ9Y6K1 MIR23C-201ENST00000579846 100 ntBASIC0.64□□□□□ -2.31
DNMT3AQ9Y6K1 MIR655-201ENST00000362159 97 ntBASIC0.63□□□□□ -2.31
DNMT3AQ9Y6K1 MIR892B-201ENST00000401279 77 ntBASIC0.63□□□□□ -2.31
DNMT3AQ9Y6K1 MIR1273G-201ENST00000577677 100 ntBASIC0.62□□□□□ -2.31
DNMT3AQ9Y6K1 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
DNMT3AQ9Y6K1 RNA5SP457-201ENST00000363657 124 ntBASIC0.61□□□□□ -2.31
DNMT3AQ9Y6K1 MIR656-201ENST00000385224 78 ntBASIC0.61□□□□□ -2.31
DNMT3AQ9Y6K1 SNORD114-23-201ENST00000363536 72 ntBASIC0.6□□□□□ -2.31
DNMT3AQ9Y6K1 SNORD74.6-201ENST00000364796 70 ntBASIC0.6□□□□□ -2.31
DNMT3AQ9Y6K1 MIR1254-1-201ENST00000408257 97 ntBASIC0.6□□□□□ -2.31
DNMT3AQ9Y6K1 SNORD75.1-201ENST00000408373 60 ntBASIC0.6□□□□□ -2.31
DNMT3AQ9Y6K1 MIR4645-201ENST00000583158 77 ntBASIC0.6□□□□□ -2.31
DNMT3AQ9Y6K1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
DNMT3AQ9Y6K1 RNU6-620P-201ENST00000384017 96 ntBASIC0.59□□□□□ -2.31
DNMT3AQ9Y6K1 MIR593-201ENST00000384856 100 ntBASIC0.59□□□□□ -2.31
DNMT3AQ9Y6K1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.59□□□□□ -2.31
DNMT3AQ9Y6K1 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
DNMT3AQ9Y6K1 MIR936-201ENST00000401264 98 ntBASIC0.58□□□□□ -2.32
DNMT3AQ9Y6K1 AP000533.3-201ENST00000447704 118 ntBASIC0.58□□□□□ -2.32
DNMT3AQ9Y6K1 AC069113.3-201ENST00000521019 150 ntBASIC0.58□□□□□ -2.32
DNMT3AQ9Y6K1 AC010487.4-201ENST00000637027 61 ntBASIC0.58□□□□□ -2.32
DNMT3AQ9Y6K1 RNA5SP26-201ENST00000362406 119 ntBASIC0.57□□□□□ -2.32
DNMT3AQ9Y6K1 Y_RNA.374-201ENST00000365606 101 ntBASIC0.57□□□□□ -2.32
DNMT3AQ9Y6K1 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
DNMT3AQ9Y6K1 MIR518B-201ENST00000385127 83 ntBASIC0.56□□□□□ -2.32
DNMT3AQ9Y6K1 MIR924-201ENST00000638017 53 ntBASIC0.56□□□□□ -2.32
DNMT3AQ9Y6K1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.55□□□□□ -2.32
DNMT3AQ9Y6K1 RNU6-1024P-201ENST00000384199 107 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms