Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CYP3A137P-201ENST00000562436 69 ntBASIC0.8□□□□□ -2.28
VPS9D1Q9Y2B5 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
VPS9D1Q9Y2B5 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
VPS9D1Q9Y2B5 SNORA68.3-201ENST00000515906 83 ntBASIC0.79□□□□□ -2.28
VPS9D1Q9Y2B5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
VPS9D1Q9Y2B5 SNORA26.4-201ENST00000391188 123 ntBASIC0.78□□□□□ -2.28
VPS9D1Q9Y2B5 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
VPS9D1Q9Y2B5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.77□□□□□ -2.29
VPS9D1Q9Y2B5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS9D1Q9Y2B5 MIR4714-201ENST00000580728 77 ntBASIC0.77□□□□□ -2.29
VPS9D1Q9Y2B5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
VPS9D1Q9Y2B5 MIR892B-201ENST00000401279 77 ntBASIC0.75□□□□□ -2.29
VPS9D1Q9Y2B5 MIR6779-201ENST00000617283 64 ntBASIC0.75□□□□□ -2.29
VPS9D1Q9Y2B5 RNA5SP62-201ENST00000363457 110 ntBASIC0.74□□□□□ -2.29
VPS9D1Q9Y2B5 SNORD114-26-201ENST00000363543 72 ntBASIC0.74□□□□□ -2.29
VPS9D1Q9Y2B5 MIR548H2-201ENST00000408874 88 ntBASIC0.74□□□□□ -2.29
VPS9D1Q9Y2B5 SNORD18.2-201ENST00000459604 70 ntBASIC0.74□□□□□ -2.29
VPS9D1Q9Y2B5 MIRLET7D-201ENST00000362263 87 ntBASIC0.73□□□□□ -2.29
VPS9D1Q9Y2B5 SNORD115-33-201ENST00000363723 82 ntBASIC0.73□□□□□ -2.29
VPS9D1Q9Y2B5 AC244250.2-201ENST00000418731 148 ntBASIC0.73□□□□□ -2.29
VPS9D1Q9Y2B5 AL445193.1-201ENST00000441183 141 ntBASIC0.73□□□□□ -2.29
VPS9D1Q9Y2B5 AC069113.3-201ENST00000521019 150 ntBASIC0.73□□□□□ -2.29
VPS9D1Q9Y2B5 MIR4280-201ENST00000582178 76 ntBASIC0.72□□□□□ -2.29
VPS9D1Q9Y2B5 MIR548N-201ENST00000408742 75 ntBASIC0.7□□□□□ -2.3
VPS9D1Q9Y2B5 SNORD74.6-201ENST00000364796 70 ntBASIC0.69□□□□□ -2.3
VPS9D1Q9Y2B5 RNA5SP121-201ENST00000516537 101 ntBASIC0.69□□□□□ -2.3
VPS9D1Q9Y2B5 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
VPS9D1Q9Y2B5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
VPS9D1Q9Y2B5 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
VPS9D1Q9Y2B5 MIR216A-201ENST00000385063 110 ntBASIC0.67□□□□□ -2.3
VPS9D1Q9Y2B5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
VPS9D1Q9Y2B5 Y_RNA.382-201ENST00000365672 114 ntBASIC0.65□□□□□ -2.31
VPS9D1Q9Y2B5 SNORD115.2-201ENST00000391126 59 ntBASIC0.65□□□□□ -2.31
VPS9D1Q9Y2B5 MIR593-201ENST00000384856 100 ntBASIC0.64□□□□□ -2.31
VPS9D1Q9Y2B5 MIR610-201ENST00000385139 96 ntBASIC0.64□□□□□ -2.31
VPS9D1Q9Y2B5 SNORD38.3-201ENST00000516599 73 ntBASIC0.64□□□□□ -2.31
VPS9D1Q9Y2B5 MIR6851-201ENST00000617060 67 ntBASIC0.64□□□□□ -2.31
VPS9D1Q9Y2B5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.64□□□□□ -2.31
VPS9D1Q9Y2B5 MIR655-201ENST00000362159 97 ntBASIC0.63□□□□□ -2.31
VPS9D1Q9Y2B5 Y_RNA.134-201ENST00000363435 105 ntBASIC0.63□□□□□ -2.31
VPS9D1Q9Y2B5 RN7SL793P-201ENST00000583259 296 ntBASIC0.63□□□□□ -2.31
VPS9D1Q9Y2B5 RNU7-165P-201ENST00000458864 60 ntBASIC0.62□□□□□ -2.31
VPS9D1Q9Y2B5 MIR4743-201ENST00000584576 69 ntBASIC0.62□□□□□ -2.31
VPS9D1Q9Y2B5 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
VPS9D1Q9Y2B5 Y_RNA.129-201ENST00000363392 110 ntBASIC0.6□□□□□ -2.31
VPS9D1Q9Y2B5 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
VPS9D1Q9Y2B5 RPL35AP4-201ENST00000412007 102 ntBASIC0.6□□□□□ -2.31
VPS9D1Q9Y2B5 RNU7-159P-201ENST00000459284 62 ntBASIC0.6□□□□□ -2.31
VPS9D1Q9Y2B5 AC090625.1-201ENST00000357130 210 ntBASIC0.59□□□□□ -2.31
VPS9D1Q9Y2B5 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
VPS9D1Q9Y2B5 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
VPS9D1Q9Y2B5 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
VPS9D1Q9Y2B5 MIR23C-201ENST00000579846 100 ntBASIC0.59□□□□□ -2.31
VPS9D1Q9Y2B5 MIR518B-201ENST00000385127 83 ntBASIC0.58□□□□□ -2.32
VPS9D1Q9Y2B5 Y_RNA.603-201ENST00000410571 108 ntBASIC0.58□□□□□ -2.32
VPS9D1Q9Y2B5 MIR4315-1-201ENST00000636800 73 ntBASIC0.58□□□□□ -2.32
VPS9D1Q9Y2B5 MIR4315-2-201ENST00000640925 73 ntBASIC0.58□□□□□ -2.32
VPS9D1Q9Y2B5 AC013734.1-201ENST00000619329 111 ntBASIC0.57□□□□□ -2.32
VPS9D1Q9Y2B5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.56□□□□□ -2.32
VPS9D1Q9Y2B5 MIR145-201ENST00000384967 88 ntBASIC0.56□□□□□ -2.32
VPS9D1Q9Y2B5 SNORD22.1-201ENST00000516331 125 ntBASIC0.56□□□□□ -2.32
VPS9D1Q9Y2B5 MIR507-201ENST00000385234 94 ntBASIC0.55□□□□□ -2.32
VPS9D1Q9Y2B5 RNA5SP67-201ENST00000516422 131 ntBASIC0.55□□□□□ -2.32
VPS9D1Q9Y2B5 Y_RNA.223-201ENST00000364290 113 ntBASIC0.54□□□□□ -2.32
VPS9D1Q9Y2B5 SNORD114-17-201ENST00000364699 75 ntBASIC0.54□□□□□ -2.32
VPS9D1Q9Y2B5 Y_RNA.320-201ENST00000365144 102 ntBASIC0.54□□□□□ -2.32
VPS9D1Q9Y2B5 MIR4711-201ENST00000578274 70 ntBASIC0.54□□□□□ -2.32
VPS9D1Q9Y2B5 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
VPS9D1Q9Y2B5 MIR581-201ENST00000384895 96 ntBASIC0.53□□□□□ -2.32
VPS9D1Q9Y2B5 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.53□□□□□ -2.32
VPS9D1Q9Y2B5 SNORD49B-201ENST00000365172 72 ntBASIC0.51□□□□□ -2.33
VPS9D1Q9Y2B5 SNORD75.1-201ENST00000408373 60 ntBASIC0.51□□□□□ -2.33
VPS9D1Q9Y2B5 RNA5SP66-201ENST00000517178 101 ntBASIC0.51□□□□□ -2.33
VPS9D1Q9Y2B5 AC010487.4-201ENST00000637027 61 ntBASIC0.51□□□□□ -2.33
VPS9D1Q9Y2B5 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
VPS9D1Q9Y2B5 RNU6-1091P-201ENST00000363945 107 ntBASIC0.49□□□□□ -2.33
VPS9D1Q9Y2B5 RNU6-46P-201ENST00000383860 107 ntBASIC0.49□□□□□ -2.33
VPS9D1Q9Y2B5 MIR193B-201ENST00000384907 83 ntBASIC0.49□□□□□ -2.33
VPS9D1Q9Y2B5 U6.97-201ENST00000636904 101 ntBASIC0.49□□□□□ -2.33
VPS9D1Q9Y2B5 Y_RNA.519-201ENST00000384553 102 ntBASIC0.48□□□□□ -2.33
VPS9D1Q9Y2B5 RNU6-68P-201ENST00000516576 104 ntBASIC0.48□□□□□ -2.33
VPS9D1Q9Y2B5 RNU6-836P-201ENST00000362920 107 ntBASIC0.47□□□□□ -2.33
VPS9D1Q9Y2B5 MIR1273G-201ENST00000577677 100 ntBASIC0.47□□□□□ -2.33
VPS9D1Q9Y2B5 AC093726.3-201ENST00000637588 150 ntBASIC0.47□□□□□ -2.33
VPS9D1Q9Y2B5 MIR379-201ENST00000362218 67 ntBASIC0.46□□□□□ -2.34
VPS9D1Q9Y2B5 RNA5SP214-201ENST00000363378 118 ntBASIC0.46□□□□□ -2.34
VPS9D1Q9Y2B5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
VPS9D1Q9Y2B5 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
VPS9D1Q9Y2B5 AP000533.3-201ENST00000447704 118 ntBASIC0.45□□□□□ -2.34
VPS9D1Q9Y2B5 Y_RNA.30-201ENST00000362572 97 ntBASIC0.44□□□□□ -2.34
VPS9D1Q9Y2B5 RNA5SP330-201ENST00000517096 96 ntBASIC0.44□□□□□ -2.34
VPS9D1Q9Y2B5 AC120024.2-201ENST00000576526 175 ntBASIC0.44□□□□□ -2.34
VPS9D1Q9Y2B5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS9D1Q9Y2B5 MIR3179-1-201ENST00000578940 84 ntBASIC0.43□□□□□ -2.34
VPS9D1Q9Y2B5 MIR3179-2-201ENST00000579107 84 ntBASIC0.43□□□□□ -2.34
VPS9D1Q9Y2B5 MIR3179-3-201ENST00000579566 84 ntBASIC0.43□□□□□ -2.34
VPS9D1Q9Y2B5 MIR3179-4-201ENST00000617599 84 ntBASIC0.43□□□□□ -2.34
VPS9D1Q9Y2B5 RNA5SP457-201ENST00000363657 124 ntBASIC0.42□□□□□ -2.34
VPS9D1Q9Y2B5 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
VPS9D1Q9Y2B5 AC090616.4-201ENST00000448026 115 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms