Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC114755.3-201ENST00000481111 251 ntBASIC0.99□□□□□ -2.25
PDZRN3Q9UPQ7 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
PDZRN3Q9UPQ7 PSMC1P5-201ENST00000512850 177 ntBASIC0.98□□□□□ -2.25
PDZRN3Q9UPQ7 MIR5683-201ENST00000636514 76 ntBASIC0.98□□□□□ -2.25
PDZRN3Q9UPQ7 SNORD114-23-201ENST00000363536 72 ntBASIC0.97□□□□□ -2.25
PDZRN3Q9UPQ7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PDZRN3Q9UPQ7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.96□□□□□ -2.26
PDZRN3Q9UPQ7 uc_338.17-201ENST00000619633 179 ntBASIC0.96□□□□□ -2.26
PDZRN3Q9UPQ7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PDZRN3Q9UPQ7 RNU6-110P-201ENST00000384508 104 ntBASIC0.95□□□□□ -2.26
PDZRN3Q9UPQ7 SNORD56B-201ENST00000384713 71 ntBASIC0.95□□□□□ -2.26
PDZRN3Q9UPQ7 RNU6-68P-201ENST00000516576 104 ntBASIC0.95□□□□□ -2.26
PDZRN3Q9UPQ7 MIR6866-201ENST00000638146 69 ntBASIC0.95□□□□□ -2.26
PDZRN3Q9UPQ7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
PDZRN3Q9UPQ7 Y_RNA.320-201ENST00000365144 102 ntBASIC0.94□□□□□ -2.26
PDZRN3Q9UPQ7 MIR581-201ENST00000384895 96 ntBASIC0.94□□□□□ -2.26
PDZRN3Q9UPQ7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.94□□□□□ -2.26
PDZRN3Q9UPQ7 MIR924-201ENST00000638017 53 ntBASIC0.94□□□□□ -2.26
PDZRN3Q9UPQ7 MIR146A-201ENST00000385201 99 ntBASIC0.93□□□□□ -2.26
PDZRN3Q9UPQ7 MIR508-201ENST00000384857 115 ntBASIC0.92□□□□□ -2.26
PDZRN3Q9UPQ7 RNU6-863P-201ENST00000515989 104 ntBASIC0.92□□□□□ -2.26
PDZRN3Q9UPQ7 SNORD44.1-201ENST00000363202 61 ntBASIC0.91□□□□□ -2.26
PDZRN3Q9UPQ7 RNU6-127P-201ENST00000390897 107 ntBASIC0.91□□□□□ -2.26
PDZRN3Q9UPQ7 MIR6514-201ENST00000622549 70 ntBASIC0.91□□□□□ -2.26
PDZRN3Q9UPQ7 SNORA26.4-201ENST00000391188 123 ntBASIC0.9□□□□□ -2.27
PDZRN3Q9UPQ7 AL353691.2-201ENST00000443795 59 ntBASIC0.9□□□□□ -2.27
PDZRN3Q9UPQ7 MIR4711-201ENST00000578274 70 ntBASIC0.9□□□□□ -2.27
PDZRN3Q9UPQ7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.9□□□□□ -2.27
PDZRN3Q9UPQ7 AC013734.1-201ENST00000619329 111 ntBASIC0.9□□□□□ -2.27
PDZRN3Q9UPQ7 RNA5SP347-201ENST00000362445 119 ntBASIC0.89□□□□□ -2.27
PDZRN3Q9UPQ7 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.89□□□□□ -2.27
PDZRN3Q9UPQ7 RNU6-836P-201ENST00000362920 107 ntBASIC0.88□□□□□ -2.27
PDZRN3Q9UPQ7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
PDZRN3Q9UPQ7 Y_RNA.129-201ENST00000363392 110 ntBASIC0.87□□□□□ -2.27
PDZRN3Q9UPQ7 Y_RNA.223-201ENST00000364290 113 ntBASIC0.87□□□□□ -2.27
PDZRN3Q9UPQ7 RNA5SP193-201ENST00000410353 107 ntBASIC0.87□□□□□ -2.27
PDZRN3Q9UPQ7 CR383656.4-201ENST00000546909 122 ntBASIC0.87□□□□□ -2.27
PDZRN3Q9UPQ7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.86□□□□□ -2.27
PDZRN3Q9UPQ7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.85□□□□□ -2.27
PDZRN3Q9UPQ7 SNORD115-33-201ENST00000363723 82 ntBASIC0.85□□□□□ -2.27
PDZRN3Q9UPQ7 RNU6-901P-201ENST00000384593 106 ntBASIC0.85□□□□□ -2.27
PDZRN3Q9UPQ7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.85□□□□□ -2.27
PDZRN3Q9UPQ7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.84□□□□□ -2.27
PDZRN3Q9UPQ7 MIR330-201ENST00000362196 94 ntBASIC0.83□□□□□ -2.28
PDZRN3Q9UPQ7 RNA5SP224-201ENST00000365069 126 ntBASIC0.83□□□□□ -2.28
PDZRN3Q9UPQ7 MIR548H2-201ENST00000408874 88 ntBASIC0.83□□□□□ -2.28
PDZRN3Q9UPQ7 RPL35AP4-201ENST00000412007 102 ntBASIC0.83□□□□□ -2.28
PDZRN3Q9UPQ7 RNA5SP330-201ENST00000517096 96 ntBASIC0.83□□□□□ -2.28
PDZRN3Q9UPQ7 MIR4280-201ENST00000582178 76 ntBASIC0.83□□□□□ -2.28
PDZRN3Q9UPQ7 MIR148A-201ENST00000362215 68 ntBASIC0.82□□□□□ -2.28
PDZRN3Q9UPQ7 RNU6-180P-201ENST00000516697 61 ntBASIC0.82□□□□□ -2.28
PDZRN3Q9UPQ7 Y_RNA.260-201ENST00000364628 101 ntBASIC0.81□□□□□ -2.28
PDZRN3Q9UPQ7 MIR103A1-201ENST00000362165 78 ntBASIC0.8□□□□□ -2.28
PDZRN3Q9UPQ7 MIR8087-201ENST00000612745 78 ntBASIC0.8□□□□□ -2.28
PDZRN3Q9UPQ7 RNA5SP163-201ENST00000410304 99 ntBASIC0.79□□□□□ -2.28
PDZRN3Q9UPQ7 AC244250.2-201ENST00000418731 148 ntBASIC0.79□□□□□ -2.28
PDZRN3Q9UPQ7 SNORD18.2-201ENST00000459604 70 ntBASIC0.79□□□□□ -2.28
PDZRN3Q9UPQ7 Y_RNA.406-201ENST00000383984 100 ntBASIC0.78□□□□□ -2.28
PDZRN3Q9UPQ7 U6.97-201ENST00000636904 101 ntBASIC0.78□□□□□ -2.28
PDZRN3Q9UPQ7 RNU6-815P-201ENST00000384080 113 ntBASIC0.77□□□□□ -2.29
PDZRN3Q9UPQ7 Y_RNA.603-201ENST00000410571 108 ntBASIC0.77□□□□□ -2.29
PDZRN3Q9UPQ7 AL445193.1-201ENST00000441183 141 ntBASIC0.77□□□□□ -2.29
PDZRN3Q9UPQ7 RNA5SP121-201ENST00000516537 101 ntBASIC0.77□□□□□ -2.29
PDZRN3Q9UPQ7 MIR548AJ2-201ENST00000408539 92 ntBASIC0.76□□□□□ -2.29
PDZRN3Q9UPQ7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
PDZRN3Q9UPQ7 SNORA68.3-201ENST00000515906 83 ntBASIC0.75□□□□□ -2.29
PDZRN3Q9UPQ7 MIR655-201ENST00000362159 97 ntBASIC0.74□□□□□ -2.29
PDZRN3Q9UPQ7 RNU6-563P-201ENST00000364872 108 ntBASIC0.74□□□□□ -2.29
PDZRN3Q9UPQ7 MIR892B-201ENST00000401279 77 ntBASIC0.74□□□□□ -2.29
PDZRN3Q9UPQ7 SNORD38.3-201ENST00000516599 73 ntBASIC0.74□□□□□ -2.29
PDZRN3Q9UPQ7 MIR5087-201ENST00000635826 76 ntBASIC0.74□□□□□ -2.29
PDZRN3Q9UPQ7 MIR379-201ENST00000362218 67 ntBASIC0.73□□□□□ -2.29
PDZRN3Q9UPQ7 MIR1197-201ENST00000408818 88 ntBASIC0.73□□□□□ -2.29
PDZRN3Q9UPQ7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
PDZRN3Q9UPQ7 Y_RNA.68-201ENST00000362881 102 ntBASIC0.72□□□□□ -2.29
PDZRN3Q9UPQ7 RNA5SP257-201ENST00000363023 116 ntBASIC0.72□□□□□ -2.29
PDZRN3Q9UPQ7 RNU6-929P-201ENST00000384429 107 ntBASIC0.72□□□□□ -2.29
PDZRN3Q9UPQ7 MIR23C-201ENST00000579846 100 ntBASIC0.72□□□□□ -2.29
PDZRN3Q9UPQ7 MIR6851-201ENST00000617060 67 ntBASIC0.72□□□□□ -2.29
PDZRN3Q9UPQ7 RNU6-1169P-201ENST00000363537 103 ntBASIC0.71□□□□□ -2.3
PDZRN3Q9UPQ7 SNORD74.6-201ENST00000364796 70 ntBASIC0.71□□□□□ -2.3
PDZRN3Q9UPQ7 MIR92A1-201ENST00000385233 78 ntBASIC0.71□□□□□ -2.3
PDZRN3Q9UPQ7 MIR507-201ENST00000385234 94 ntBASIC0.71□□□□□ -2.3
PDZRN3Q9UPQ7 RNU6-695P-201ENST00000391157 104 ntBASIC0.71□□□□□ -2.3
PDZRN3Q9UPQ7 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
PDZRN3Q9UPQ7 AC120024.2-201ENST00000576526 175 ntBASIC0.7□□□□□ -2.3
PDZRN3Q9UPQ7 FTX_4.1-201ENST00000616291 147 ntBASIC0.7□□□□□ -2.3
PDZRN3Q9UPQ7 SNORD45C-201ENST00000383893 79 ntBASIC0.69□□□□□ -2.3
PDZRN3Q9UPQ7 MIRLET7D-201ENST00000362263 87 ntBASIC0.67□□□□□ -2.3
PDZRN3Q9UPQ7 SNORD114-17-201ENST00000364699 75 ntBASIC0.67□□□□□ -2.3
PDZRN3Q9UPQ7 Y_RNA.335-201ENST00000365299 96 ntBASIC0.67□□□□□ -2.3
PDZRN3Q9UPQ7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.67□□□□□ -2.3
PDZRN3Q9UPQ7 AC090616.4-201ENST00000448026 115 ntBASIC0.67□□□□□ -2.3
PDZRN3Q9UPQ7 AC069113.3-201ENST00000521019 150 ntBASIC0.67□□□□□ -2.3
PDZRN3Q9UPQ7 Y_RNA.178-201ENST00000363832 102 ntBASIC0.66□□□□□ -2.3
PDZRN3Q9UPQ7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.66□□□□□ -2.3
PDZRN3Q9UPQ7 SNORD22.1-201ENST00000516331 125 ntBASIC0.66□□□□□ -2.3
PDZRN3Q9UPQ7 SNORD18C-201ENST00000362704 69 ntBASIC0.65□□□□□ -2.31
PDZRN3Q9UPQ7 RNA5SP62-201ENST00000363457 110 ntBASIC0.65□□□□□ -2.31
PDZRN3Q9UPQ7 RNU6-912P-201ENST00000363800 104 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms