Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC069113.3-201ENST00000521019 150 ntBASIC0.86□□□□□ -2.27
MS4A3Q96HJ5 MIRLET7D-201ENST00000362263 87 ntBASIC0.85□□□□□ -2.27
MS4A3Q96HJ5 RNA5SP62-201ENST00000363457 110 ntBASIC0.85□□□□□ -2.27
MS4A3Q96HJ5 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
MS4A3Q96HJ5 MIR655-201ENST00000362159 97 ntBASIC0.84□□□□□ -2.27
MS4A3Q96HJ5 SNORD38.3-201ENST00000516599 73 ntBASIC0.84□□□□□ -2.27
MS4A3Q96HJ5 MIR6767-201ENST00000637302 66 ntBASIC0.84□□□□□ -2.27
MS4A3Q96HJ5 Y_RNA.406-201ENST00000383984 100 ntBASIC0.83□□□□□ -2.28
MS4A3Q96HJ5 MIR1276-201ENST00000408707 83 ntBASIC0.83□□□□□ -2.28
MS4A3Q96HJ5 U6.97-201ENST00000636904 101 ntBASIC0.83□□□□□ -2.28
MS4A3Q96HJ5 MIR507-201ENST00000385234 94 ntBASIC0.82□□□□□ -2.28
MS4A3Q96HJ5 Y_RNA.676-201ENST00000516393 96 ntBASIC0.82□□□□□ -2.28
MS4A3Q96HJ5 MIR4743-201ENST00000584576 69 ntBASIC0.82□□□□□ -2.28
MS4A3Q96HJ5 SNORD18C-201ENST00000362704 69 ntBASIC0.81□□□□□ -2.28
MS4A3Q96HJ5 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
MS4A3Q96HJ5 RNU1-93P-201ENST00000364704 169 ntBASIC0.79□□□□□ -2.28
MS4A3Q96HJ5 SNORD114-22-201ENST00000365423 72 ntBASIC0.79□□□□□ -2.28
MS4A3Q96HJ5 RNU6-929P-201ENST00000384429 107 ntBASIC0.79□□□□□ -2.28
MS4A3Q96HJ5 MIR518B-201ENST00000385127 83 ntBASIC0.79□□□□□ -2.28
MS4A3Q96HJ5 MIR548AJ2-201ENST00000408539 92 ntBASIC0.79□□□□□ -2.28
MS4A3Q96HJ5 AC120024.2-201ENST00000576526 175 ntBASIC0.79□□□□□ -2.28
MS4A3Q96HJ5 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
MS4A3Q96HJ5 Y_RNA.335-201ENST00000365299 96 ntBASIC0.78□□□□□ -2.28
MS4A3Q96HJ5 MIR532-201ENST00000385025 91 ntBASIC0.78□□□□□ -2.28
MS4A3Q96HJ5 MIR216A-201ENST00000385063 110 ntBASIC0.78□□□□□ -2.28
MS4A3Q96HJ5 MIR610-201ENST00000385139 96 ntBASIC0.78□□□□□ -2.28
MS4A3Q96HJ5 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
MS4A3Q96HJ5 RNU7-165P-201ENST00000458864 60 ntBASIC0.78□□□□□ -2.28
MS4A3Q96HJ5 SNORD22.1-201ENST00000516331 125 ntBASIC0.78□□□□□ -2.28
MS4A3Q96HJ5 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
MS4A3Q96HJ5 SNORD114-17-201ENST00000364699 75 ntBASIC0.77□□□□□ -2.29
MS4A3Q96HJ5 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
MS4A3Q96HJ5 RNU6-695P-201ENST00000391157 104 ntBASIC0.76□□□□□ -2.29
MS4A3Q96HJ5 SNORD75.1-201ENST00000408373 60 ntBASIC0.76□□□□□ -2.29
MS4A3Q96HJ5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
MS4A3Q96HJ5 RNU7-159P-201ENST00000459284 62 ntBASIC0.76□□□□□ -2.29
MS4A3Q96HJ5 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
MS4A3Q96HJ5 MIR499A-201ENST00000384903 122 ntBASIC0.75□□□□□ -2.29
MS4A3Q96HJ5 RNU6-563P-201ENST00000364872 108 ntBASIC0.74□□□□□ -2.29
MS4A3Q96HJ5 MIR593-201ENST00000384856 100 ntBASIC0.74□□□□□ -2.29
MS4A3Q96HJ5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
MS4A3Q96HJ5 MIR6857-201ENST00000613267 93 ntBASIC0.74□□□□□ -2.29
MS4A3Q96HJ5 FTX_4.1-201ENST00000616291 147 ntBASIC0.74□□□□□ -2.29
MS4A3Q96HJ5 SNORD45C-201ENST00000383893 79 ntBASIC0.73□□□□□ -2.29
MS4A3Q96HJ5 MIR1197-201ENST00000408818 88 ntBASIC0.73□□□□□ -2.29
MS4A3Q96HJ5 MIR4452-201ENST00000583004 71 ntBASIC0.73□□□□□ -2.29
MS4A3Q96HJ5 Y_RNA.781-201ENST00000620301 103 ntBASIC0.73□□□□□ -2.29
MS4A3Q96HJ5 Y_RNA.226-201ENST00000364337 114 ntBASIC0.72□□□□□ -2.29
MS4A3Q96HJ5 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
MS4A3Q96HJ5 AC090616.4-201ENST00000448026 115 ntBASIC0.71□□□□□ -2.3
MS4A3Q96HJ5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
MS4A3Q96HJ5 AC090625.1-201ENST00000357130 210 ntBASIC0.7□□□□□ -2.3
MS4A3Q96HJ5 MIR1287-201ENST00000408492 90 ntBASIC0.7□□□□□ -2.3
MS4A3Q96HJ5 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
MS4A3Q96HJ5 RNA5SP66-201ENST00000517178 101 ntBASIC0.7□□□□□ -2.3
MS4A3Q96HJ5 MIR4315-1-201ENST00000636800 73 ntBASIC0.69□□□□□ -2.3
MS4A3Q96HJ5 MIR4315-2-201ENST00000640925 73 ntBASIC0.69□□□□□ -2.3
MS4A3Q96HJ5 RNU6-1169P-201ENST00000363537 103 ntBASIC0.68□□□□□ -2.3
MS4A3Q96HJ5 AC093726.3-201ENST00000637588 150 ntBASIC0.68□□□□□ -2.3
MS4A3Q96HJ5 SNORD49B-201ENST00000365172 72 ntBASIC0.67□□□□□ -2.3
MS4A3Q96HJ5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.67□□□□□ -2.3
MS4A3Q96HJ5 RNU6-46P-201ENST00000383860 107 ntBASIC0.67□□□□□ -2.3
MS4A3Q96HJ5 MIR145-201ENST00000384967 88 ntBASIC0.67□□□□□ -2.3
MS4A3Q96HJ5 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
MS4A3Q96HJ5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
MS4A3Q96HJ5 AP000533.3-201ENST00000447704 118 ntBASIC0.65□□□□□ -2.31
MS4A3Q96HJ5 SNORA13-201ENST00000458790 133 ntBASIC0.65□□□□□ -2.31
MS4A3Q96HJ5 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
MS4A3Q96HJ5 Y_RNA.189-201ENST00000363959 112 ntBASIC0.64□□□□□ -2.31
MS4A3Q96HJ5 MIR6788-201ENST00000618842 66 ntBASIC0.64□□□□□ -2.31
MS4A3Q96HJ5 MIR3179-1-201ENST00000578940 84 ntBASIC0.63□□□□□ -2.31
MS4A3Q96HJ5 MIR3179-2-201ENST00000579107 84 ntBASIC0.63□□□□□ -2.31
MS4A3Q96HJ5 MIR3179-3-201ENST00000579566 84 ntBASIC0.63□□□□□ -2.31
MS4A3Q96HJ5 MIR3179-4-201ENST00000617599 84 ntBASIC0.63□□□□□ -2.31
MS4A3Q96HJ5 RNU6-912P-201ENST00000363800 104 ntBASIC0.62□□□□□ -2.31
MS4A3Q96HJ5 SNORA32.1-201ENST00000364514 115 ntBASIC0.62□□□□□ -2.31
MS4A3Q96HJ5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
MS4A3Q96HJ5 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
MS4A3Q96HJ5 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
MS4A3Q96HJ5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
MS4A3Q96HJ5 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
MS4A3Q96HJ5 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
MS4A3Q96HJ5 AL590491.3-201ENST00000610731 82 ntBASIC0.59□□□□□ -2.31
MS4A3Q96HJ5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.59□□□□□ -2.31
MS4A3Q96HJ5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.58□□□□□ -2.32
MS4A3Q96HJ5 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.58□□□□□ -2.32
MS4A3Q96HJ5 RNA5SP26-201ENST00000362406 119 ntBASIC0.57□□□□□ -2.32
MS4A3Q96HJ5 MIR6734-201ENST00000621166 68 ntBASIC0.56□□□□□ -2.32
MS4A3Q96HJ5 MIR656-201ENST00000385224 78 ntBASIC0.55□□□□□ -2.32
MS4A3Q96HJ5 RNA5SP220-201ENST00000516298 104 ntBASIC0.55□□□□□ -2.32
MS4A3Q96HJ5 MIR5000-201ENST00000577717 103 ntBASIC0.55□□□□□ -2.32
MS4A3Q96HJ5 MIR4645-201ENST00000583158 77 ntBASIC0.55□□□□□ -2.32
MS4A3Q96HJ5 MIR204-201ENST00000385200 110 ntBASIC0.54□□□□□ -2.32
MS4A3Q96HJ5 RNA5SP214-201ENST00000363378 118 ntBASIC0.52□□□□□ -2.33
MS4A3Q96HJ5 RNU6-42P-201ENST00000384165 107 ntBASIC0.51□□□□□ -2.33
MS4A3Q96HJ5 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
MS4A3Q96HJ5 RNA5SP436-201ENST00000516020 115 ntBASIC0.51□□□□□ -2.33
MS4A3Q96HJ5 MIR4263-201ENST00000584745 83 ntBASIC0.51□□□□□ -2.33
MS4A3Q96HJ5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.5□□□□□ -2.33
MS4A3Q96HJ5 AC022709.1-201ENST00000615967 87 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms