Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MIR507-201ENST00000385234 94 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 RNU6-587P-201ENST00000391282 106 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 MIR548Q-201ENST00000408404 100 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 RNU6-706P-201ENST00000517229 104 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 MIR4712-201ENST00000583750 82 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 U6.58-201ENST00000613107 107 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 RNA5SP26-201ENST00000362406 119 ntBASIC-1.15□□□□□ -2.59
SNRNP40Q96DI7 SNORD113.1-201ENST00000363280 73 ntBASIC-1.15□□□□□ -2.59
SNRNP40Q96DI7 MIR630-201ENST00000384957 97 ntBASIC-1.15□□□□□ -2.59
SNRNP40Q96DI7 MIR29B1-201ENST00000385015 81 ntBASIC-1.15□□□□□ -2.59
SNRNP40Q96DI7 SNORD19-201ENST00000391191 68 ntBASIC-1.15□□□□□ -2.59
SNRNP40Q96DI7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.15□□□□□ -2.59
SNRNP40Q96DI7 AP002795.1-201ENST00000534879 84 ntBASIC-1.15□□□□□ -2.59
SNRNP40Q96DI7 MIR1245B-201ENST00000636115 69 ntBASIC-1.15□□□□□ -2.59
SNRNP40Q96DI7 RNU6-668P-201ENST00000364180 107 ntBASIC-1.16□□□□□ -2.6
SNRNP40Q96DI7 MIR3165-201ENST00000579874 75 ntBASIC-1.16□□□□□ -2.6
SNRNP40Q96DI7 U4.4-201ENST00000620626 117 ntBASIC-1.16□□□□□ -2.6
SNRNP40Q96DI7 MIR450A2-201ENST00000385022 100 ntBASIC-1.17□□□□□ -2.6
SNRNP40Q96DI7 RNA5SP215-201ENST00000363440 122 ntBASIC-1.18□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.18□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 RNU6-294P-201ENST00000364999 102 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 RPL35AP4-201ENST00000412007 102 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 AC138207.3-201ENST00000585289 166 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 MIR6502-201ENST00000617296 76 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 AC091912.2-201ENST00000624798 167 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 MIR5683-201ENST00000636514 76 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.19□□□□□ -2.6
SNRNP40Q96DI7 MIR429-201ENST00000362106 83 ntBASIC-1.2□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.2□□□□□ -2.6
SNRNP40Q96DI7 RNU6-226P-201ENST00000363778 107 ntBASIC-1.2□□□□□ -2.6
SNRNP40Q96DI7 RNU6-242P-201ENST00000384359 107 ntBASIC-1.2□□□□□ -2.6
SNRNP40Q96DI7 HLA-S-202ENST00000425174 53 ntBASIC-1.2□□□□□ -2.6
SNRNP40Q96DI7 MIR4666B-201ENST00000578142 81 ntBASIC-1.2□□□□□ -2.6
SNRNP40Q96DI7 MIR5591-201ENST00000578248 65 ntBASIC-1.2□□□□□ -2.6
SNRNP40Q96DI7 MIR6874-201ENST00000635894 71 ntBASIC-1.2□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.21□□□□□ -2.6
SNRNP40Q96DI7 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.21□□□□□ -2.6
SNRNP40Q96DI7 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.21□□□□□ -2.6
SNRNP40Q96DI7 RNU6-70P-201ENST00000516438 60 ntBASIC-1.21□□□□□ -2.6
SNRNP40Q96DI7 MIR4520-1-201ENST00000582609 70 ntBASIC-1.21□□□□□ -2.6
SNRNP40Q96DI7 MIR4490-201ENST00000582647 84 ntBASIC-1.21□□□□□ -2.6
SNRNP40Q96DI7 U4.2-201ENST00000618561 85 ntBASIC-1.21□□□□□ -2.6
SNRNP40Q96DI7 RNU6-576P-201ENST00000390854 102 ntBASIC-1.22□□□□□ -2.6
SNRNP40Q96DI7 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.23□□□□□ -2.61
SNRNP40Q96DI7 MIR154-201ENST00000385243 84 ntBASIC-1.23□□□□□ -2.61
SNRNP40Q96DI7 RNU6-696P-201ENST00000390834 107 ntBASIC-1.23□□□□□ -2.61
SNRNP40Q96DI7 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.23□□□□□ -2.61
SNRNP40Q96DI7 MIR5582-201ENST00000579697 68 ntBASIC-1.23□□□□□ -2.61
SNRNP40Q96DI7 SNORD113-2-201ENST00000391082 72 ntBASIC-1.25□□□□□ -2.61
SNRNP40Q96DI7 RNA5SP461-201ENST00000516451 104 ntBASIC-1.25□□□□□ -2.61
SNRNP40Q96DI7 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.25□□□□□ -2.61
SNRNP40Q96DI7 RNU6-598P-201ENST00000364017 105 ntBASIC-1.26□□□□□ -2.61
SNRNP40Q96DI7 RNU6-895P-201ENST00000384125 103 ntBASIC-1.26□□□□□ -2.61
SNRNP40Q96DI7 RNU6-820P-201ENST00000384273 107 ntBASIC-1.26□□□□□ -2.61
SNRNP40Q96DI7 MIR1207-201ENST00000408249 87 ntBASIC-1.26□□□□□ -2.61
SNRNP40Q96DI7 U2.18-201ENST00000622185 84 ntBASIC-1.26□□□□□ -2.61
SNRNP40Q96DI7 RNA5SP173-201ENST00000364857 136 ntBASIC-1.27□□□□□ -2.61
SNRNP40Q96DI7 MIR4770-201ENST00000579149 58 ntBASIC-1.27□□□□□ -2.61
SNRNP40Q96DI7 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.28□□□□□ -2.61
SNRNP40Q96DI7 RNU6-164P-201ENST00000364604 103 ntBASIC-1.28□□□□□ -2.61
SNRNP40Q96DI7 RNU6-787P-201ENST00000384032 107 ntBASIC-1.28□□□□□ -2.61
SNRNP40Q96DI7 SNORD116-16-201ENST00000384533 92 ntBASIC-1.28□□□□□ -2.61
SNRNP40Q96DI7 MIR3134-201ENST00000579433 74 ntBASIC-1.28□□□□□ -2.61
SNRNP40Q96DI7 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.29□□□□□ -2.62
SNRNP40Q96DI7 SNORD116-24-201ENST00000384549 92 ntBASIC-1.29□□□□□ -2.62
SNRNP40Q96DI7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.29□□□□□ -2.62
SNRNP40Q96DI7 RNA5SP86-201ENST00000390869 98 ntBASIC-1.3□□□□□ -2.62
SNRNP40Q96DI7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.3□□□□□ -2.62
SNRNP40Q96DI7 SNORD114-3-201ENST00000364969 75 ntBASIC-1.31□□□□□ -2.62
SNRNP40Q96DI7 SNORD115-31-201ENST00000365318 82 ntBASIC-1.31□□□□□ -2.62
SNRNP40Q96DI7 RNU6-630P-201ENST00000391258 106 ntBASIC-1.31□□□□□ -2.62
SNRNP40Q96DI7 AC062037.1-201ENST00000605302 128 ntBASIC-1.31□□□□□ -2.62
SNRNP40Q96DI7 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.32□□□□□ -2.62
SNRNP40Q96DI7 SNORA41B-201ENST00000384785 128 ntBASIC-1.32□□□□□ -2.62
SNRNP40Q96DI7 AC090616.4-201ENST00000448026 115 ntBASIC-1.32□□□□□ -2.62
SNRNP40Q96DI7 RNU6-687P-201ENST00000516443 89 ntBASIC-1.33□□□□□ -2.62
SNRNP40Q96DI7 RNU6-540P-201ENST00000384622 101 ntBASIC-1.34□□□□□ -2.62
SNRNP40Q96DI7 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.34□□□□□ -2.62
SNRNP40Q96DI7 MIR365A-201ENST00000362260 87 ntBASIC-1.35□□□□□ -2.63
SNRNP40Q96DI7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.36□□□□□ -2.63
SNRNP40Q96DI7 MIR487B-201ENST00000385021 84 ntBASIC-1.36□□□□□ -2.63
SNRNP40Q96DI7 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.37□□□□□ -2.63
SNRNP40Q96DI7 MIR520D-201ENST00000385002 87 ntBASIC-1.37□□□□□ -2.63
SNRNP40Q96DI7 RNU6-411P-201ENST00000384451 107 ntBASIC-1.38□□□□□ -2.63
SNRNP40Q96DI7 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.38□□□□□ -2.63
SNRNP40Q96DI7 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.38□□□□□ -2.63
SNRNP40Q96DI7 RNA5SP170-201ENST00000517150 101 ntBASIC-1.38□□□□□ -2.63
SNRNP40Q96DI7 MIR548H1-201ENST00000408610 102 ntBASIC-1.39□□□□□ -2.63
SNRNP40Q96DI7 MIR1246-201ENST00000636535 73 ntBASIC-1.39□□□□□ -2.63
SNRNP40Q96DI7 SNORD1B-201ENST00000363091 84 ntBASIC-1.4□□□□□ -2.63
SNRNP40Q96DI7 RNU6-608P-201ENST00000383927 104 ntBASIC-1.4□□□□□ -2.63
SNRNP40Q96DI7 MIR548AA1-201ENST00000384971 97 ntBASIC-1.4□□□□□ -2.63
SNRNP40Q96DI7 RNU6-542P-201ENST00000516405 103 ntBASIC-1.4□□□□□ -2.63
SNRNP40Q96DI7 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 394.5 ms