Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MIR5582-201ENST00000579697 68 ntBASIC-1.07□□□□□ -2.58
NEDD4P46934 MIR494-201ENST00000349529 81 ntBASIC-1.08□□□□□ -2.58
NEDD4P46934 RNU6-698P-201ENST00000363523 107 ntBASIC-1.08□□□□□ -2.58
NEDD4P46934 RNU6-34P-201ENST00000364874 107 ntBASIC-1.08□□□□□ -2.58
NEDD4P46934 MIR1285-2-201ENST00000408311 88 ntBASIC-1.08□□□□□ -2.58
NEDD4P46934 MIR4666B-201ENST00000578142 81 ntBASIC-1.08□□□□□ -2.58
NEDD4P46934 MIR4441-201ENST00000582623 100 ntBASIC-1.08□□□□□ -2.58
NEDD4P46934 MIR4712-201ENST00000583750 82 ntBASIC-1.08□□□□□ -2.58
NEDD4P46934 SNORD113.1-201ENST00000363280 73 ntBASIC-1.09□□□□□ -2.58
NEDD4P46934 RNA5SP215-201ENST00000363440 122 ntBASIC-1.09□□□□□ -2.58
NEDD4P46934 RNU6-668P-201ENST00000364180 107 ntBASIC-1.09□□□□□ -2.58
NEDD4P46934 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.09□□□□□ -2.58
NEDD4P46934 MIR429-201ENST00000362106 83 ntBASIC-1.1□□□□□ -2.59
NEDD4P46934 SNORD114-3-201ENST00000364969 75 ntBASIC-1.1□□□□□ -2.59
NEDD4P46934 SNORD63.1-201ENST00000516178 80 ntBASIC-1.1□□□□□ -2.59
NEDD4P46934 MIR548AG1-201ENST00000579932 66 ntBASIC-1.1□□□□□ -2.59
NEDD4P46934 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.11□□□□□ -2.59
NEDD4P46934 RNU6-246P-201ENST00000384702 107 ntBASIC-1.12□□□□□ -2.59
NEDD4P46934 RNU6-587P-201ENST00000391282 106 ntBASIC-1.12□□□□□ -2.59
NEDD4P46934 AL353691.2-201ENST00000443795 59 ntBASIC-1.12□□□□□ -2.59
NEDD4P46934 RNU6-732P-201ENST00000516033 103 ntBASIC-1.13□□□□□ -2.59
NEDD4P46934 U7.5-201ENST00000517224 61 ntBASIC-1.13□□□□□ -2.59
NEDD4P46934 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.14□□□□□ -2.59
NEDD4P46934 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.14□□□□□ -2.59
NEDD4P46934 MIR527-201ENST00000385244 85 ntBASIC-1.14□□□□□ -2.59
NEDD4P46934 RNU6-706P-201ENST00000517229 104 ntBASIC-1.14□□□□□ -2.59
NEDD4P46934 MIR664A-201ENST00000626086 82 ntBASIC-1.14□□□□□ -2.59
NEDD4P46934 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 RNA5SP173-201ENST00000364857 136 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 RNU6-458P-201ENST00000384179 107 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 SNORD45A-201ENST00000384512 84 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 RNU6-70P-201ENST00000516438 60 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 MIR548V-201ENST00000584165 80 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 U6.58-201ENST00000613107 107 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 MIR889-201ENST00000401280 79 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 MIR1207-201ENST00000408249 87 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 MIR6818-201ENST00000621576 65 ntBASIC-1.15□□□□□ -2.59
NEDD4P46934 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.16□□□□□ -2.6
NEDD4P46934 SNORD113-2-201ENST00000391082 72 ntBASIC-1.16□□□□□ -2.6
NEDD4P46934 RNU7-88P-201ENST00000458752 63 ntBASIC-1.16□□□□□ -2.6
NEDD4P46934 MIR154-201ENST00000385243 84 ntBASIC-1.17□□□□□ -2.6
NEDD4P46934 U4.4-201ENST00000620626 117 ntBASIC-1.17□□□□□ -2.6
NEDD4P46934 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.17□□□□□ -2.6
NEDD4P46934 MIR29B1-201ENST00000385015 81 ntBASIC-1.18□□□□□ -2.6
NEDD4P46934 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.18□□□□□ -2.6
NEDD4P46934 RNA5SP26-201ENST00000362406 119 ntBASIC-1.19□□□□□ -2.6
NEDD4P46934 RNY4P27-201ENST00000363341 96 ntBASIC-1.19□□□□□ -2.6
NEDD4P46934 RNU6-895P-201ENST00000384125 103 ntBASIC-1.19□□□□□ -2.6
NEDD4P46934 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.19□□□□□ -2.6
NEDD4P46934 RNU6-696P-201ENST00000390834 107 ntBASIC-1.19□□□□□ -2.6
NEDD4P46934 RNA5SP170-201ENST00000517150 101 ntBASIC-1.19□□□□□ -2.6
NEDD4P46934 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.19□□□□□ -2.6
NEDD4P46934 MIR1246-201ENST00000636535 73 ntBASIC-1.19□□□□□ -2.6
NEDD4P46934 RNU6-787P-201ENST00000384032 107 ntBASIC-1.21□□□□□ -2.6
NEDD4P46934 MIR630-201ENST00000384957 97 ntBASIC-1.21□□□□□ -2.6
NEDD4P46934 SNORD19-201ENST00000391191 68 ntBASIC-1.21□□□□□ -2.6
NEDD4P46934 MIR4490-201ENST00000582647 84 ntBASIC-1.21□□□□□ -2.6
NEDD4P46934 AC062037.1-201ENST00000605302 128 ntBASIC-1.21□□□□□ -2.6
NEDD4P46934 AC091912.2-201ENST00000624798 167 ntBASIC-1.21□□□□□ -2.6
NEDD4P46934 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.22□□□□□ -2.61
NEDD4P46934 HLA-S-202ENST00000425174 53 ntBASIC-1.22□□□□□ -2.61
NEDD4P46934 AC138207.3-201ENST00000585289 166 ntBASIC-1.22□□□□□ -2.61
NEDD4P46934 MIR5683-201ENST00000636514 76 ntBASIC-1.22□□□□□ -2.61
NEDD4P46934 MIR6874-201ENST00000635894 71 ntBASIC-1.23□□□□□ -2.61
NEDD4P46934 RNU6-576P-201ENST00000390854 102 ntBASIC-1.24□□□□□ -2.61
NEDD4P46934 AP002795.1-201ENST00000534879 84 ntBASIC-1.24□□□□□ -2.61
NEDD4P46934 MIR5591-201ENST00000578248 65 ntBASIC-1.24□□□□□ -2.61
NEDD4P46934 MIR4520-1-201ENST00000582609 70 ntBASIC-1.24□□□□□ -2.61
NEDD4P46934 RNU6-226P-201ENST00000363778 107 ntBASIC-1.25□□□□□ -2.61
NEDD4P46934 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.25□□□□□ -2.61
NEDD4P46934 MIR3134-201ENST00000579433 74 ntBASIC-1.25□□□□□ -2.61
NEDD4P46934 U7.4-201ENST00000614961 63 ntBASIC-1.25□□□□□ -2.61
NEDD4P46934 MIR6502-201ENST00000617296 76 ntBASIC-1.25□□□□□ -2.61
NEDD4P46934 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.26□□□□□ -2.61
NEDD4P46934 RNU6-411P-201ENST00000384451 107 ntBASIC-1.26□□□□□ -2.61
NEDD4P46934 MIR548Q-201ENST00000408404 100 ntBASIC-1.26□□□□□ -2.61
NEDD4P46934 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.26□□□□□ -2.61
NEDD4P46934 RNU6-687P-201ENST00000516443 89 ntBASIC-1.26□□□□□ -2.61
NEDD4P46934 SNORD116-16-201ENST00000384533 92 ntBASIC-1.27□□□□□ -2.61
NEDD4P46934 SNORD116-24-201ENST00000384549 92 ntBASIC-1.27□□□□□ -2.61
NEDD4P46934 MIR507-201ENST00000385234 94 ntBASIC-1.27□□□□□ -2.61
NEDD4P46934 MIR3202-2-201ENST00000635980 79 ntBASIC-1.27□□□□□ -2.61
NEDD4P46934 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.28□□□□□ -2.61
NEDD4P46934 RNU6-598P-201ENST00000364017 105 ntBASIC-1.29□□□□□ -2.62
NEDD4P46934 SNORD73B-201ENST00000364394 72 ntBASIC-1.29□□□□□ -2.62
NEDD4P46934 SNORD115-31-201ENST00000365318 82 ntBASIC-1.29□□□□□ -2.62
NEDD4P46934 RNU6-164P-201ENST00000364604 103 ntBASIC-1.31□□□□□ -2.62
NEDD4P46934 RNU6-542P-201ENST00000516405 103 ntBASIC-1.31□□□□□ -2.62
NEDD4P46934 MIR4770-201ENST00000579149 58 ntBASIC-1.31□□□□□ -2.62
NEDD4P46934 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.32□□□□□ -2.62
NEDD4P46934 RPL35AP4-201ENST00000412007 102 ntBASIC-1.32□□□□□ -2.62
NEDD4P46934 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.33□□□□□ -2.62
NEDD4P46934 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.33□□□□□ -2.62
NEDD4P46934 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.34□□□□□ -2.62
NEDD4P46934 SNORA26.2-201ENST00000390922 122 ntBASIC-1.34□□□□□ -2.62
NEDD4P46934 SNORA41B-201ENST00000384785 128 ntBASIC-1.35□□□□□ -2.63
NEDD4P46934 MIR548AA1-201ENST00000384971 97 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms