Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-815P-201ENST00000384080 113 ntBASIC0.72□□□□□ -2.29
ALDH1A1P00352 MIR520D-201ENST00000385002 87 ntBASIC0.72□□□□□ -2.29
ALDH1A1P00352 SNORD19-201ENST00000391191 68 ntBASIC0.72□□□□□ -2.29
ALDH1A1P00352 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
ALDH1A1P00352 MIR548H2-201ENST00000408874 88 ntBASIC0.71□□□□□ -2.3
ALDH1A1P00352 MIR6854-201ENST00000614935 69 ntBASIC0.71□□□□□ -2.3
ALDH1A1P00352 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
ALDH1A1P00352 MIR148A-201ENST00000362215 68 ntBASIC0.69□□□□□ -2.3
ALDH1A1P00352 MIRLET7D-201ENST00000362263 87 ntBASIC0.69□□□□□ -2.3
ALDH1A1P00352 MIR643-201ENST00000385267 97 ntBASIC0.69□□□□□ -2.3
ALDH1A1P00352 RNU6-180P-201ENST00000516697 61 ntBASIC0.69□□□□□ -2.3
ALDH1A1P00352 MIR124-2-201ENST00000385081 109 ntBASIC0.68□□□□□ -2.3
ALDH1A1P00352 SNORA27.2-201ENST00000363365 126 ntBASIC0.67□□□□□ -2.3
ALDH1A1P00352 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 SNORD56B-201ENST00000384713 71 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 MIR548Q-201ENST00000408404 100 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 AC114755.3-201ENST00000481111 251 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 RNA5SP476-201ENST00000516613 103 ntBASIC0.66□□□□□ -2.3
ALDH1A1P00352 RNA5SP163-201ENST00000410304 99 ntBASIC0.65□□□□□ -2.31
ALDH1A1P00352 Y_RNA.699-201ENST00000516803 93 ntBASIC0.65□□□□□ -2.31
ALDH1A1P00352 AC069113.3-201ENST00000521019 150 ntBASIC0.65□□□□□ -2.31
ALDH1A1P00352 RNU6-1233P-201ENST00000362922 102 ntBASIC0.64□□□□□ -2.31
ALDH1A1P00352 VTRNA1-3-201ENST00000365645 89 ntBASIC0.64□□□□□ -2.31
ALDH1A1P00352 RNU6-1326P-201ENST00000391262 107 ntBASIC0.64□□□□□ -2.31
ALDH1A1P00352 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
ALDH1A1P00352 SNORA62.5-201ENST00000516634 120 ntBASIC0.63□□□□□ -2.31
ALDH1A1P00352 MIR2909-201ENST00000617113 69 ntBASIC0.63□□□□□ -2.31
ALDH1A1P00352 MIR4426-201ENST00000640330 63 ntBASIC0.62□□□□□ -2.31
ALDH1A1P00352 Y_RNA.345-201ENST00000365384 92 ntBASIC0.61□□□□□ -2.31
ALDH1A1P00352 MIR4317-201ENST00000637586 65 ntBASIC0.61□□□□□ -2.31
ALDH1A1P00352 RNU6-1047P-201ENST00000364418 107 ntBASIC0.6□□□□□ -2.31
ALDH1A1P00352 RNU6-901P-201ENST00000384593 106 ntBASIC0.6□□□□□ -2.31
ALDH1A1P00352 AC114737.2-201ENST00000421583 173 ntBASIC0.6□□□□□ -2.31
ALDH1A1P00352 AC244250.2-201ENST00000418731 148 ntBASIC0.59□□□□□ -2.31
ALDH1A1P00352 HAR1A.1-201ENST00000459583 118 ntBASIC0.59□□□□□ -2.31
ALDH1A1P00352 AP002795.1-201ENST00000534879 84 ntBASIC0.59□□□□□ -2.31
ALDH1A1P00352 SNORA50A-201ENST00000384225 134 ntBASIC0.58□□□□□ -2.32
ALDH1A1P00352 MIR892B-201ENST00000401279 77 ntBASIC0.58□□□□□ -2.32
ALDH1A1P00352 RNU6-361P-201ENST00000364454 107 ntBASIC0.57□□□□□ -2.32
ALDH1A1P00352 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
ALDH1A1P00352 RNA5SP63-201ENST00000391225 112 ntBASIC0.57□□□□□ -2.32
ALDH1A1P00352 MIR4280-201ENST00000582178 76 ntBASIC0.56□□□□□ -2.32
ALDH1A1P00352 AC138207.3-201ENST00000585289 166 ntBASIC0.56□□□□□ -2.32
ALDH1A1P00352 AC023932.2-201ENST00000603176 175 ntBASIC0.56□□□□□ -2.32
ALDH1A1P00352 MIR655-201ENST00000362159 97 ntBASIC0.55□□□□□ -2.32
ALDH1A1P00352 Y_RNA.206-201ENST00000364136 102 ntBASIC0.55□□□□□ -2.32
ALDH1A1P00352 RNA5SP285-201ENST00000516619 119 ntBASIC0.54□□□□□ -2.32
ALDH1A1P00352 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
ALDH1A1P00352 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
ALDH1A1P00352 RNU6-608P-201ENST00000383927 104 ntBASIC0.53□□□□□ -2.32
ALDH1A1P00352 RNA5SP169-201ENST00000517268 117 ntBASIC0.53□□□□□ -2.32
ALDH1A1P00352 AC090625.1-201ENST00000357130 210 ntBASIC0.52□□□□□ -2.33
ALDH1A1P00352 RNU7-165P-201ENST00000458864 60 ntBASIC0.52□□□□□ -2.33
ALDH1A1P00352 MIR4743-201ENST00000584576 69 ntBASIC0.52□□□□□ -2.33
ALDH1A1P00352 RNU6-1327P-201ENST00000365302 105 ntBASIC0.51□□□□□ -2.33
ALDH1A1P00352 MIR593-201ENST00000384856 100 ntBASIC0.51□□□□□ -2.33
ALDH1A1P00352 MIR202-201ENST00000362219 110 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 SNORA26.4-201ENST00000391188 123 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 MIR5683-201ENST00000636514 76 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 MIR4315-1-201ENST00000636800 73 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 MIR4315-2-201ENST00000640925 73 ntBASIC0.5□□□□□ -2.33
ALDH1A1P00352 MIR610-201ENST00000385139 96 ntBASIC0.49□□□□□ -2.33
ALDH1A1P00352 RNY3P8-201ENST00000411366 126 ntBASIC0.49□□□□□ -2.33
ALDH1A1P00352 AL445193.1-201ENST00000441183 141 ntBASIC0.49□□□□□ -2.33
ALDH1A1P00352 RNU6-300P-201ENST00000459080 104 ntBASIC0.48□□□□□ -2.33
ALDH1A1P00352 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
ALDH1A1P00352 AL353691.2-201ENST00000443795 59 ntBASIC0.47□□□□□ -2.33
ALDH1A1P00352 MIR6851-201ENST00000617060 67 ntBASIC0.47□□□□□ -2.33
ALDH1A1P00352 MIR6086-201ENST00000638065 55 ntBASIC0.47□□□□□ -2.33
ALDH1A1P00352 MIR145-201ENST00000384967 88 ntBASIC0.46□□□□□ -2.34
ALDH1A1P00352 SNORA17.4-201ENST00000391287 132 ntBASIC0.46□□□□□ -2.34
ALDH1A1P00352 RNY1P9-201ENST00000532431 109 ntBASIC0.46□□□□□ -2.34
ALDH1A1P00352 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.45□□□□□ -2.34
ALDH1A1P00352 RNU7-159P-201ENST00000459284 62 ntBASIC0.45□□□□□ -2.34
ALDH1A1P00352 SNORD38.3-201ENST00000516599 73 ntBASIC0.45□□□□□ -2.34
ALDH1A1P00352 SNORD115-33-201ENST00000363723 82 ntBASIC0.44□□□□□ -2.34
ALDH1A1P00352 SNORD74.6-201ENST00000364796 70 ntBASIC0.44□□□□□ -2.34
ALDH1A1P00352 SNORD18.2-201ENST00000459604 70 ntBASIC0.44□□□□□ -2.34
ALDH1A1P00352 RNU6-894P-201ENST00000517094 105 ntBASIC0.41□□□□□ -2.34
ALDH1A1P00352 RNU6-176P-201ENST00000517196 105 ntBASIC0.41□□□□□ -2.34
ALDH1A1P00352 RNA5SP214-201ENST00000363378 118 ntBASIC0.39□□□□□ -2.35
ALDH1A1P00352 SNORD49B-201ENST00000365172 72 ntBASIC0.37□□□□□ -2.35
ALDH1A1P00352 RNU6-46P-201ENST00000383860 107 ntBASIC0.36□□□□□ -2.35
ALDH1A1P00352 MIR6759-201ENST00000638110 65 ntBASIC0.36□□□□□ -2.35
ALDH1A1P00352 SNORD114-9-201ENST00000364370 72 ntBASIC0.35□□□□□ -2.35
ALDH1A1P00352 MIR518B-201ENST00000385127 83 ntBASIC0.35□□□□□ -2.35
ALDH1A1P00352 SNORD111B-201ENST00000408587 80 ntBASIC0.35□□□□□ -2.35
ALDH1A1P00352 SNORD22.1-201ENST00000516331 125 ntBASIC0.35□□□□□ -2.35
ALDH1A1P00352 SNORD114-5-201ENST00000362928 70 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 SNORD60-201ENST00000383903 83 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 AL590491.3-201ENST00000610731 82 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.36
ALDH1A1P00352 MIR548N-201ENST00000408742 75 ntBASIC0.33□□□□□ -2.36
ALDH1A1P00352 RNA5SP66-201ENST00000517178 101 ntBASIC0.33□□□□□ -2.36
ALDH1A1P00352 RNU6-929P-201ENST00000384429 107 ntBASIC0.32□□□□□ -2.36
ALDH1A1P00352 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
ALDH1A1P00352 SNORD114-17-201ENST00000364699 75 ntBASIC0.3□□□□□ -2.36
ALDH1A1P00352 RNU6-133P-201ENST00000383989 107 ntBASIC0.3□□□□□ -2.36
ALDH1A1P00352 SNORD75.1-201ENST00000408373 60 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms