Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 MIR6515-201ENST00000619843 57 ntBASIC1.01□□□□□ -2.25
NPM3O75607 MIR548H2-201ENST00000408874 88 ntBASIC0.99□□□□□ -2.25
NPM3O75607 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
NPM3O75607 SNORA26.4-201ENST00000391188 123 ntBASIC0.98□□□□□ -2.25
NPM3O75607 AC244250.2-201ENST00000418731 148 ntBASIC0.98□□□□□ -2.25
NPM3O75607 PVT1_3.1-201ENST00000620853 95 ntBASIC0.98□□□□□ -2.25
NPM3O75607 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
NPM3O75607 SNORD18.2-201ENST00000459604 70 ntBASIC0.96□□□□□ -2.26
NPM3O75607 SNORD74.6-201ENST00000364796 70 ntBASIC0.95□□□□□ -2.26
NPM3O75607 MIR598-201ENST00000384868 97 ntBASIC0.95□□□□□ -2.26
NPM3O75607 AL445193.1-201ENST00000441183 141 ntBASIC0.95□□□□□ -2.26
NPM3O75607 SNORD115-33-201ENST00000363723 82 ntBASIC0.93□□□□□ -2.26
NPM3O75607 RNY3P8-201ENST00000411366 126 ntBASIC0.93□□□□□ -2.26
NPM3O75607 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
NPM3O75607 RNU6-1327P-201ENST00000365302 105 ntBASIC0.92□□□□□ -2.26
NPM3O75607 RNU6-133P-201ENST00000383989 107 ntBASIC0.92□□□□□ -2.26
NPM3O75607 MIR4315-1-201ENST00000636800 73 ntBASIC0.92□□□□□ -2.26
NPM3O75607 MIR4315-2-201ENST00000640925 73 ntBASIC0.92□□□□□ -2.26
NPM3O75607 RNU7-159P-201ENST00000459284 62 ntBASIC0.91□□□□□ -2.26
NPM3O75607 MIR4280-201ENST00000582178 76 ntBASIC0.91□□□□□ -2.26
NPM3O75607 SNORD60-201ENST00000383903 83 ntBASIC0.9□□□□□ -2.27
NPM3O75607 RNU6-608P-201ENST00000383927 104 ntBASIC0.9□□□□□ -2.27
NPM3O75607 MIR593-201ENST00000384856 100 ntBASIC0.9□□□□□ -2.27
NPM3O75607 RNU7-165P-201ENST00000458864 60 ntBASIC0.9□□□□□ -2.27
NPM3O75607 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
NPM3O75607 AP002795.1-201ENST00000534879 84 ntBASIC0.9□□□□□ -2.27
NPM3O75607 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
NPM3O75607 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
NPM3O75607 SNORD114-26-201ENST00000363543 72 ntBASIC0.87□□□□□ -2.27
NPM3O75607 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
NPM3O75607 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
NPM3O75607 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
NPM3O75607 RNA5SP480-201ENST00000516840 109 ntBASIC0.84□□□□□ -2.27
NPM3O75607 MIR6851-201ENST00000617060 67 ntBASIC0.84□□□□□ -2.27
NPM3O75607 MIR6513-201ENST00000621188 64 ntBASIC0.83□□□□□ -2.28
NPM3O75607 MIR655-201ENST00000362159 97 ntBASIC0.81□□□□□ -2.28
NPM3O75607 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
NPM3O75607 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
NPM3O75607 MIR145-201ENST00000384967 88 ntBASIC0.8□□□□□ -2.28
NPM3O75607 SNORD38.3-201ENST00000516599 73 ntBASIC0.78□□□□□ -2.28
NPM3O75607 RNU6-46P-201ENST00000383860 107 ntBASIC0.77□□□□□ -2.29
NPM3O75607 MIR936-201ENST00000401264 98 ntBASIC0.76□□□□□ -2.29
NPM3O75607 MIR518B-201ENST00000385127 83 ntBASIC0.75□□□□□ -2.29
NPM3O75607 SNORD111B-201ENST00000408587 80 ntBASIC0.75□□□□□ -2.29
NPM3O75607 RN7SL793P-201ENST00000583259 296 ntBASIC0.75□□□□□ -2.29
NPM3O75607 RNA5SP193-201ENST00000410353 107 ntBASIC0.73□□□□□ -2.29
NPM3O75607 RNA5SP347-201ENST00000362445 119 ntBASIC0.72□□□□□ -2.29
NPM3O75607 SNORD49B-201ENST00000365172 72 ntBASIC0.72□□□□□ -2.29
NPM3O75607 MIR4711-201ENST00000578274 70 ntBASIC0.72□□□□□ -2.29
NPM3O75607 MIR23C-201ENST00000579846 100 ntBASIC0.72□□□□□ -2.29
NPM3O75607 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
NPM3O75607 RNA5SP66-201ENST00000517178 101 ntBASIC0.7□□□□□ -2.3
NPM3O75607 RNA5SP214-201ENST00000363378 118 ntBASIC0.68□□□□□ -2.3
NPM3O75607 MIR548N-201ENST00000408742 75 ntBASIC0.68□□□□□ -2.3
NPM3O75607 MIR6779-201ENST00000617283 64 ntBASIC0.68□□□□□ -2.3
NPM3O75607 RNU6-485P-201ENST00000363475 107 ntBASIC0.67□□□□□ -2.3
NPM3O75607 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
NPM3O75607 SNORD22.1-201ENST00000516331 125 ntBASIC0.66□□□□□ -2.3
NPM3O75607 AC093726.3-201ENST00000637588 150 ntBASIC0.66□□□□□ -2.3
NPM3O75607 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.65□□□□□ -2.31
NPM3O75607 SNORD75.1-201ENST00000408373 60 ntBASIC0.62□□□□□ -2.31
NPM3O75607 AC010487.4-201ENST00000637027 61 ntBASIC0.62□□□□□ -2.31
NPM3O75607 SNORD114-23-201ENST00000363536 72 ntBASIC0.61□□□□□ -2.31
NPM3O75607 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
NPM3O75607 SNORD114-17-201ENST00000364699 75 ntBASIC0.6□□□□□ -2.31
NPM3O75607 RNA5SP134-201ENST00000516492 96 ntBASIC0.59□□□□□ -2.31
NPM3O75607 MIR507-201ENST00000385234 94 ntBASIC0.58□□□□□ -2.32
NPM3O75607 SNORA13-201ENST00000458790 133 ntBASIC0.58□□□□□ -2.32
NPM3O75607 MIR4263-201ENST00000584745 83 ntBASIC0.58□□□□□ -2.32
NPM3O75607 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.58□□□□□ -2.32
NPM3O75607 Y_RNA.129-201ENST00000363392 110 ntBASIC0.57□□□□□ -2.32
NPM3O75607 Y_RNA.603-201ENST00000410571 108 ntBASIC0.57□□□□□ -2.32
NPM3O75607 SNORD114-5-201ENST00000362928 70 ntBASIC0.56□□□□□ -2.32
NPM3O75607 MIR193B-201ENST00000384907 83 ntBASIC0.56□□□□□ -2.32
NPM3O75607 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
NPM3O75607 RPL35AP4-201ENST00000412007 102 ntBASIC0.56□□□□□ -2.32
NPM3O75607 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
NPM3O75607 AC104692.1-201ENST00000472406 90 ntBASIC0.56□□□□□ -2.32
NPM3O75607 SNORD114-9-201ENST00000364370 72 ntBASIC0.55□□□□□ -2.32
NPM3O75607 MIR1273G-201ENST00000577677 100 ntBASIC0.54□□□□□ -2.32
NPM3O75607 VTRNA1-3-201ENST00000365645 89 ntBASIC0.53□□□□□ -2.32
NPM3O75607 MIR204-201ENST00000385200 110 ntBASIC0.53□□□□□ -2.32
NPM3O75607 RNU6-929P-201ENST00000384429 107 ntBASIC0.52□□□□□ -2.33
NPM3O75607 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
NPM3O75607 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.52□□□□□ -2.33
NPM3O75607 AP000533.3-201ENST00000447704 118 ntBASIC0.51□□□□□ -2.33
NPM3O75607 MIR3179-1-201ENST00000578940 84 ntBASIC0.51□□□□□ -2.33
NPM3O75607 MIR3179-2-201ENST00000579107 84 ntBASIC0.51□□□□□ -2.33
NPM3O75607 MIR3179-3-201ENST00000579566 84 ntBASIC0.51□□□□□ -2.33
NPM3O75607 MIR3179-4-201ENST00000617599 84 ntBASIC0.51□□□□□ -2.33
NPM3O75607 AL590491.3-201ENST00000610731 82 ntBASIC0.5□□□□□ -2.33
NPM3O75607 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
NPM3O75607 MIR330-201ENST00000362196 94 ntBASIC0.48□□□□□ -2.33
NPM3O75607 Y_RNA.382-201ENST00000365672 114 ntBASIC0.48□□□□□ -2.33
NPM3O75607 MIR924-201ENST00000638017 53 ntBASIC0.48□□□□□ -2.33
NPM3O75607 SNORD115.2-201ENST00000391126 59 ntBASIC0.46□□□□□ -2.34
NPM3O75607 RNA5SP457-201ENST00000363657 124 ntBASIC0.44□□□□□ -2.34
NPM3O75607 Y_RNA.189-201ENST00000363959 112 ntBASIC0.44□□□□□ -2.34
NPM3O75607 AC013734.1-201ENST00000619329 111 ntBASIC0.43□□□□□ -2.34
NPM3O75607 RNA5SP330-201ENST00000517096 96 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms