Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AP001340.1-201ENST00000624405 217 ntBASIC-1.71□□□□□ -2.68
CLDN6P56747 RNU6-797P-201ENST00000363101 109 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 RNU6-832P-201ENST00000363319 107 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 RNU6-106P-201ENST00000384405 107 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 RNU6-987P-201ENST00000384759 104 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 RNU6-530P-201ENST00000391180 107 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 RNU6-971P-201ENST00000516920 106 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 AC025166.1-201ENST00000612411 163 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 U2.7-201ENST00000619197 100 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.72□□□□□ -2.68
CLDN6P56747 SNORD18C-201ENST00000362704 69 ntBASIC-1.73□□□□□ -2.69
CLDN6P56747 SNORD114-13-201ENST00000364377 74 ntBASIC-1.73□□□□□ -2.69
CLDN6P56747 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.73□□□□□ -2.69
CLDN6P56747 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.73□□□□□ -2.69
CLDN6P56747 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.74□□□□□ -2.69
CLDN6P56747 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.74□□□□□ -2.69
CLDN6P56747 MIR1254-1-201ENST00000408257 97 ntBASIC-1.74□□□□□ -2.69
CLDN6P56747 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.74□□□□□ -2.69
CLDN6P56747 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.74□□□□□ -2.69
CLDN6P56747 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.75□□□□□ -2.69
CLDN6P56747 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.75□□□□□ -2.69
CLDN6P56747 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.75□□□□□ -2.69
CLDN6P56747 SNORA81.3-201ENST00000517283 198 ntBASIC-1.75□□□□□ -2.69
CLDN6P56747 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.75□□□□□ -2.69
CLDN6P56747 MIR6739-201ENST00000622461 75 ntBASIC-1.75□□□□□ -2.69
CLDN6P56747 MIR4773-1-201ENST00000637203 78 ntBASIC-1.75□□□□□ -2.69
CLDN6P56747 RNU6-340P-201ENST00000364005 107 ntBASIC-1.76□□□□□ -2.69
CLDN6P56747 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.76□□□□□ -2.69
CLDN6P56747 RNU6-68P-201ENST00000516576 104 ntBASIC-1.76□□□□□ -2.69
CLDN6P56747 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.76□□□□□ -2.69
CLDN6P56747 U7.2-201ENST00000607576 63 ntBASIC-1.76□□□□□ -2.69
CLDN6P56747 RNY3P2-201ENST00000362918 102 ntBASIC-1.77□□□□□ -2.69
CLDN6P56747 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.77□□□□□ -2.69
CLDN6P56747 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.77□□□□□ -2.69
CLDN6P56747 RNU6-656P-201ENST00000516785 107 ntBASIC-1.77□□□□□ -2.69
CLDN6P56747 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 RNU6-669P-201ENST00000365575 107 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 MIR568-201ENST00000385036 95 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 SNORD115-45-201ENST00000391078 81 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 RNU6-644P-201ENST00000391155 98 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 MTND3P2-201ENST00000438452 342 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 MIR4439-201ENST00000583746 80 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 AC006254.2-201ENST00000603259 279 ntBASIC-1.78□□□□□ -2.69
CLDN6P56747 RNU6-834P-201ENST00000362367 110 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 RNU6-247P-201ENST00000362636 107 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 SNORA27.2-201ENST00000363365 126 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 SNORD58C-201ENST00000365223 64 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 RNU6-738P-201ENST00000384531 106 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 SNORD4B-201ENST00000459083 72 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 AL117351.2-201ENST00000513571 157 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 SNORD63.2-201ENST00000516303 64 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 MIR548Z-201ENST00000584743 97 ntBASIC-1.79□□□□□ -2.7
CLDN6P56747 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.8□□□□□ -2.7
CLDN6P56747 AL691482.2-201ENST00000457453 84 ntBASIC-1.8□□□□□ -2.7
CLDN6P56747 RNU7-151P-201ENST00000516930 53 ntBASIC-1.8□□□□□ -2.7
CLDN6P56747 MIR548X2-201ENST00000579776 100 ntBASIC-1.8□□□□□ -2.7
CLDN6P56747 MIR202-201ENST00000362219 110 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 RNY1P1-201ENST00000364372 112 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 SNORD45B-201ENST00000364617 72 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 SNORD116-18-201ENST00000383961 92 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 AC103810.7-201ENST00000607821 91 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 AL359920.1-201ENST00000618332 176 ntBASIC-1.81□□□□□ -2.7
CLDN6P56747 MIR579-201ENST00000385221 98 ntBASIC-1.82□□□□□ -2.7
CLDN6P56747 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
CLDN6P56747 RNA5SP292-201ENST00000390974 118 ntBASIC-1.82□□□□□ -2.7
CLDN6P56747 RNU6-587P-201ENST00000391282 106 ntBASIC-1.82□□□□□ -2.7
CLDN6P56747 RNU6-519P-201ENST00000410590 108 ntBASIC-1.82□□□□□ -2.7
CLDN6P56747 MTATP6P29-201ENST00000415057 132 ntBASIC-1.82□□□□□ -2.7
CLDN6P56747 RNU7-120P-201ENST00000459334 63 ntBASIC-1.82□□□□□ -2.7
CLDN6P56747 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.82□□□□□ -2.7
CLDN6P56747 SNORA63-201ENST00000363450 132 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 RNU6-737P-201ENST00000365370 107 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 RNU6-813P-201ENST00000384691 107 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 MIR548AA1-201ENST00000384971 97 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 MIR548N-201ENST00000408742 75 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 AL118496.2-201ENST00000448300 230 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 RNU7-174P-201ENST00000516248 59 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 RNU6-807P-201ENST00000516805 107 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 MIR3613-201ENST00000579844 87 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 AL035470.1-201ENST00000622571 220 ntBASIC-1.83□□□□□ -2.7
CLDN6P56747 MIR548C-201ENST00000384815 97 ntBASIC-1.84□□□□□ -2.7
CLDN6P56747 RNU6-523P-201ENST00000516304 54 ntBASIC-1.84□□□□□ -2.7
CLDN6P56747 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.85□□□□□ -2.71
CLDN6P56747 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.85□□□□□ -2.71
CLDN6P56747 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.85□□□□□ -2.71
CLDN6P56747 U6.81-201ENST00000612550 106 ntBASIC-1.85□□□□□ -2.71
CLDN6P56747 U4.4-201ENST00000620626 117 ntBASIC-1.85□□□□□ -2.71
CLDN6P56747 RNU6-668P-201ENST00000364180 107 ntBASIC-1.86□□□□□ -2.71
CLDN6P56747 RNU6-649P-201ENST00000384463 107 ntBASIC-1.86□□□□□ -2.71
CLDN6P56747 MIR548A3-201ENST00000385297 97 ntBASIC-1.86□□□□□ -2.71
CLDN6P56747 MIR548I1-201ENST00000408810 149 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms