Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 U2.7-201ENST00000619197 100 ntBASIC-2.06□□□□□ -2.74
SGCEO43556 RNU6-630P-201ENST00000391258 106 ntBASIC-2.07□□□□□ -2.74
SGCEO43556 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.07□□□□□ -2.74
SGCEO43556 RNY4-201ENST00000516507 96 ntBASIC-2.07□□□□□ -2.74
SGCEO43556 FTX_4.1-201ENST00000616291 147 ntBASIC-2.07□□□□□ -2.74
SGCEO43556 AP001340.1-201ENST00000624405 217 ntBASIC-2.07□□□□□ -2.74
SGCEO43556 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 SNORA33.2-201ENST00000365413 134 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 RNU6-639P-201ENST00000384074 107 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 AL118496.2-201ENST00000448300 230 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 RNU4-71P-201ENST00000516258 113 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 RNU6-656P-201ENST00000516785 107 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 SNORA81.3-201ENST00000517283 198 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 AC025166.1-201ENST00000612411 163 ntBASIC-2.08□□□□□ -2.74
SGCEO43556 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.09□□□□□ -2.74
SGCEO43556 MIR4679-2-201ENST00000578358 77 ntBASIC-2.09□□□□□ -2.74
SGCEO43556 MIR548S-201ENST00000581352 82 ntBASIC-2.09□□□□□ -2.74
SGCEO43556 AL035470.1-201ENST00000622571 220 ntBASIC-2.09□□□□□ -2.74
SGCEO43556 RNU6-694P-201ENST00000364071 147 ntBASIC-2.1□□□□□ -2.75
SGCEO43556 RNU6-141P-201ENST00000410499 105 ntBASIC-2.1□□□□□ -2.75
SGCEO43556 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.1□□□□□ -2.75
SGCEO43556 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.11□□□□□ -2.75
SGCEO43556 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.11□□□□□ -2.75
SGCEO43556 RNU6-696P-201ENST00000390834 107 ntBASIC-2.11□□□□□ -2.75
SGCEO43556 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.11□□□□□ -2.75
SGCEO43556 AC022559.1-201ENST00000520905 205 ntBASIC-2.11□□□□□ -2.75
SGCEO43556 AC020661.2-201ENST00000560114 134 ntBASIC-2.11□□□□□ -2.75
SGCEO43556 MIR4777-201ENST00000583710 86 ntBASIC-2.11□□□□□ -2.75
SGCEO43556 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.11□□□□□ -2.75
SGCEO43556 AC013734.1-201ENST00000619329 111 ntBASIC-2.11□□□□□ -2.75
SGCEO43556 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 RNY4P9-201ENST00000363194 97 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 SNORD58C-201ENST00000365223 64 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 RNU6-458P-201ENST00000384179 107 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 MIR23C-201ENST00000579846 100 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 MIR4796-201ENST00000580742 81 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 U6.58-201ENST00000613107 107 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 AC141273.2-201ENST00000618989 130 ntBASIC-2.12□□□□□ -2.75
SGCEO43556 MTATP8P1-201ENST00000467115 207 ntBASIC-2.13□□□□□ -2.75
SGCEO43556 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.13□□□□□ -2.75
SGCEO43556 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.13□□□□□ -2.75
SGCEO43556 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.13□□□□□ -2.75
SGCEO43556 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.13□□□□□ -2.75
SGCEO43556 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.13□□□□□ -2.75
SGCEO43556 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.14□□□□□ -2.75
SGCEO43556 RNU6-861P-201ENST00000516745 106 ntBASIC-2.14□□□□□ -2.75
SGCEO43556 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.14□□□□□ -2.75
SGCEO43556 RNY3P14-201ENST00000384309 102 ntBASIC-2.15□□□□□ -2.75
SGCEO43556 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.15□□□□□ -2.75
SGCEO43556 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.15□□□□□ -2.75
SGCEO43556 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.15□□□□□ -2.75
SGCEO43556 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.16□□□□□ -2.76
SGCEO43556 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.16□□□□□ -2.76
SGCEO43556 AC097484.2-201ENST00000509147 251 ntBASIC-2.16□□□□□ -2.76
SGCEO43556 U7.2-201ENST00000607576 63 ntBASIC-2.16□□□□□ -2.76
SGCEO43556 U6.97-201ENST00000636904 101 ntBASIC-2.16□□□□□ -2.76
SGCEO43556 RNU6-340P-201ENST00000364005 107 ntBASIC-2.17□□□□□ -2.76
SGCEO43556 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.17□□□□□ -2.76
SGCEO43556 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.17□□□□□ -2.76
SGCEO43556 MIR548A3-201ENST00000385297 97 ntBASIC-2.17□□□□□ -2.76
SGCEO43556 AC072026.1-201ENST00000605023 201 ntBASIC-2.17□□□□□ -2.76
SGCEO43556 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.17□□□□□ -2.76
SGCEO43556 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 RNU6-682P-201ENST00000363843 106 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 SNORD58A-201ENST00000383875 65 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 MIR513C-201ENST00000401352 84 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 MIR548F4-201ENST00000408515 105 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 MIR5009-201ENST00000578736 100 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 MIR3144-201ENST00000579460 79 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 AC012531.4-201ENST00000616509 177 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.18□□□□□ -2.76
SGCEO43556 RNU6-681P-201ENST00000364012 104 ntBASIC-2.19□□□□□ -2.76
SGCEO43556 AL450471.1-201ENST00000447509 127 ntBASIC-2.19□□□□□ -2.76
SGCEO43556 RNU6-803P-201ENST00000516034 102 ntBASIC-2.19□□□□□ -2.76
SGCEO43556 RNU6-795P-201ENST00000516323 103 ntBASIC-2.19□□□□□ -2.76
SGCEO43556 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.19□□□□□ -2.76
SGCEO43556 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.2□□□□□ -2.76
SGCEO43556 RNU6-645P-201ENST00000364649 106 ntBASIC-2.2□□□□□ -2.76
SGCEO43556 AC005520.4-201ENST00000604337 90 ntBASIC-2.2□□□□□ -2.76
SGCEO43556 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.21□□□□□ -2.76
SGCEO43556 RNU6-972P-201ENST00000391208 107 ntBASIC-2.21□□□□□ -2.76
SGCEO43556 RNU7-174P-201ENST00000516248 59 ntBASIC-2.21□□□□□ -2.76
SGCEO43556 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.21□□□□□ -2.76
SGCEO43556 RNU6-111P-201ENST00000517179 105 ntBASIC-2.21□□□□□ -2.76
SGCEO43556 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.21□□□□□ -2.76
SGCEO43556 MIR429-201ENST00000362106 83 ntBASIC-2.22□□□□□ -2.76
SGCEO43556 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.22□□□□□ -2.76
SGCEO43556 MIR1236-201ENST00000408340 102 ntBASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 223.7 ms