Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PdfS4R2K0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdfS4R2K0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Prob1-201ENSMUST00000097619 3021 ntBASIC12.26□□□□□ -0.45
PdfS4R2K0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.26□□□□□ -0.45
PdfS4R2K0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.26□□□□□ -0.45
PdfS4R2K0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
PdfS4R2K0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdfS4R2K0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PdfS4R2K0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Mir6982-201ENSMUST00000184354 68 ntBASIC12.25□□□□□ -0.45
PdfS4R2K0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.25□□□□□ -0.45
PdfS4R2K0 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.25□□□□□ -0.45
PdfS4R2K0 Odf3b-204ENSMUST00000227834 930 ntBASIC12.25□□□□□ -0.45
PdfS4R2K0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PdfS4R2K0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdfS4R2K0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
PdfS4R2K0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms