Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Gm27389-201ENSMUST00000183622 195 ntBASIC14.39□□□□□ -0.11
H2afb3S4R1G7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
H2afb3S4R1G7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H2afb3S4R1G7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Gm7889-201ENSMUST00000185591 958 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms