Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.45□□□□□ -0.42
CcsQ9WU84 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.44□□□□□ -0.42
CcsQ9WU84 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CcsQ9WU84 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.44□□□□□ -0.42
CcsQ9WU84 Gm37055-201ENSMUST00000191866 133 ntBASIC12.44□□□□□ -0.42
CcsQ9WU84 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.44□□□□□ -0.42
CcsQ9WU84 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.44□□□□□ -0.42
CcsQ9WU84 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CcsQ9WU84 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CcsQ9WU84 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.44□□□□□ -0.42
CcsQ9WU84 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcsQ9WU84 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Gm10418-201ENSMUST00000100943 576 ntBASIC12.43□□□□□ -0.42
CcsQ9WU84 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CcsQ9WU84 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Mir8112-201ENSMUST00000184382 131 ntBASIC12.43□□□□□ -0.42
CcsQ9WU84 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcsQ9WU84 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CcsQ9WU84 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.42□□□□□ -0.42
CcsQ9WU84 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms