Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Gm28925-201ENSMUST00000188586 168 ntBASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Gm38216-201ENSMUST00000194872 1214 ntBASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Gm12467-201ENSMUST00000117625 745 ntBASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Gm44450-201ENSMUST00000199528 114 ntBASIC16.36■□□□□ 0.21
Msh5Q9QUM7 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Msh5Q9QUM7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Gm18351-201ENSMUST00000188646 883 ntBASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh5Q9QUM7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Gm44387-201ENSMUST00000196298 145 ntBASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms