Protein–RNA interactions for Protein: Q9JMB8

Cntn6, Contactin-6, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn6Q9JMB8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cntn6Q9JMB8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Gm43514-201ENSMUST00000198852 424 ntBASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cntn6Q9JMB8 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cntn6Q9JMB8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Gm14722-201ENSMUST00000118943 689 ntBASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Gm37153-201ENSMUST00000193637 231 ntBASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn6Q9JMB8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Psmb5-202ENSMUST00000227257 622 ntBASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn6Q9JMB8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cntn6Q9JMB8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn6Q9JMB8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms