Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpsf1Q9EPU4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpsf1Q9EPU4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Cpsf1Q9EPU4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC21.92■■□□□ 1.1
Cpsf1Q9EPU4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpsf1Q9EPU4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Gm11873-201ENSMUST00000117877 1304 ntBASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Gm13337-201ENSMUST00000119183 1594 ntBASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
Cpsf1Q9EPU4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Gm4899-201ENSMUST00000178708 719 ntBASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf1Q9EPU4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Gm25925-201ENSMUST00000158314 306 ntBASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Gm7286-201ENSMUST00000182691 1007 ntBASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf1Q9EPU4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 CT943659.1-201ENSMUST00000215459 326 ntBASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 AC160980.1-201ENSMUST00000224136 970 ntBASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf1Q9EPU4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf1Q9EPU4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Gm38318-201ENSMUST00000195769 1706 ntBASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Gm45167-201ENSMUST00000208007 322 ntBASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cpsf1Q9EPU4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms