Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hmgn3Q9DCB1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Gm18025-201ENSMUST00000221733 862 ntBASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.03■□□□□ -0
Hmgn3Q9DCB1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Sybu-209ENSMUST00000228639 4113 ntBASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.03■□□□□ -0
Hmgn3Q9DCB1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hmgn3Q9DCB1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn3Q9DCB1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Gm9731-201ENSMUST00000209480 747 ntBASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn3Q9DCB1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hmgn3Q9DCB1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn3Q9DCB1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hmgn3Q9DCB1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms