Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph3bQ9DA80 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rsph3bQ9DA80 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rsph3bQ9DA80 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Mir5126-201ENSMUST00000175513 77 ntBASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph3bQ9DA80 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Gm27525-201ENSMUST00000184465 107 ntBASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.44■□□□□ 0.38
Rsph3bQ9DA80 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gm11780-201ENSMUST00000136880 516 ntBASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gm6089-201ENSMUST00000197666 938 ntBASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rsph3bQ9DA80 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms