Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gtf3c6Q9D8P7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gtf3c6Q9D8P7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Gm15794-201ENSMUST00000120182 631 ntBASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gtf3c6Q9D8P7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.05■□□□□ 0.32
Gtf3c6Q9D8P7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gtf3c6Q9D8P7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms