Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm13418-201ENSMUST00000119097 944 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm7862-201ENSMUST00000121461 292 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
U2af1Q9D883 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm8825-201ENSMUST00000182565 998 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm4518-201ENSMUST00000182638 718 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.96■□□□□ 0.95
U2af1Q9D883 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
U2af1Q9D883 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.96■□□□□ 0.95
U2af1Q9D883 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2af1Q9D883 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
U2af1Q9D883 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.96■□□□□ 0.95
U2af1Q9D883 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2af1Q9D883 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.96■□□□□ 0.95
U2af1Q9D883 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
U2af1Q9D883 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
U2af1Q9D883 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
U2af1Q9D883 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.95■□□□□ 0.94
U2af1Q9D883 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
U2af1Q9D883 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
U2af1Q9D883 Gm4535-201ENSMUST00000182274 558 ntBASIC20.95■□□□□ 0.94
U2af1Q9D883 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
U2af1Q9D883 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.95■□□□□ 0.94
U2af1Q9D883 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
U2af1Q9D883 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Gm10355-201ENSMUST00000097146 517 ntBASIC20.95■□□□□ 0.94
U2af1Q9D883 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
U2af1Q9D883 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2af1Q9D883 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
U2af1Q9D883 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.94■□□□□ 0.94
U2af1Q9D883 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
U2af1Q9D883 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.94■□□□□ 0.94
U2af1Q9D883 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
U2af1Q9D883 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.94■□□□□ 0.94
U2af1Q9D883 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
U2af1Q9D883 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
U2af1Q9D883 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
U2af1Q9D883 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.93■□□□□ 0.94
U2af1Q9D883 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.93■□□□□ 0.94
U2af1Q9D883 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.93■□□□□ 0.94
U2af1Q9D883 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.93■□□□□ 0.94
U2af1Q9D883 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.93■□□□□ 0.94
U2af1Q9D883 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
U2af1Q9D883 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms