Protein–RNA interactions for Protein: Q9D0B6

Pbdc1, Protein PBDC1, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbdc1Q9D0B6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Gm7791-201ENSMUST00000219066 539 ntBASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pbdc1Q9D0B6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pbdc1Q9D0B6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pbdc1Q9D0B6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pbdc1Q9D0B6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Pbdc1Q9D0B6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pbdc1Q9D0B6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms