Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.8□□□□□ -0.04
Trim13Q9CYB0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim13Q9CYB0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.78□□□□□ -0.04
Trim13Q9CYB0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim13Q9CYB0 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim13Q9CYB0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms