Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm7Q9CQQ8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm8825-201ENSMUST00000182565 998 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm4518-201ENSMUST00000182638 718 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lsm7Q9CQQ8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Mir5131-201ENSMUST00000175426 93 ntBASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lsm7Q9CQQ8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Lsm7Q9CQQ8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lsm7Q9CQQ8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lsm7Q9CQQ8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lsm7Q9CQQ8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lsm7Q9CQQ8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Lsm7Q9CQQ8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Gm15173-201ENSMUST00000122049 433 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms