Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Gm11745-201ENSMUST00000121669 448 ntBASIC19.66■□□□□ 0.74
RtcbQ99LF4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RtcbQ99LF4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.65■□□□□ 0.74
RtcbQ99LF4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RtcbQ99LF4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RtcbQ99LF4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.74
RtcbQ99LF4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RtcbQ99LF4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RtcbQ99LF4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.63■□□□□ 0.73
RtcbQ99LF4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Mir6990-201ENSMUST00000183724 91 ntBASIC19.63■□□□□ 0.73
RtcbQ99LF4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Mir7023-201ENSMUST00000185093 64 ntBASIC19.63■□□□□ 0.73
RtcbQ99LF4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.63■□□□□ 0.73
RtcbQ99LF4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RtcbQ99LF4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RtcbQ99LF4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RtcbQ99LF4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RtcbQ99LF4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RtcbQ99LF4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RtcbQ99LF4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RtcbQ99LF4 Gm25948-201ENSMUST00000175334 112 ntBASIC19.62■□□□□ 0.73
RtcbQ99LF4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RtcbQ99LF4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RtcbQ99LF4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RtcbQ99LF4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms