Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.36■□□□□ 0.53
Rfc4Q99J62 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Gm13216-201ENSMUST00000117145 591 ntBASIC18.35■□□□□ 0.53
Rfc4Q99J62 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.35■□□□□ 0.53
Rfc4Q99J62 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Chchd1-203ENSMUST00000224633 557 ntBASIC18.35■□□□□ 0.53
Rfc4Q99J62 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rfc4Q99J62 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.34■□□□□ 0.53
Rfc4Q99J62 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Gm15920-201ENSMUST00000118998 402 ntBASIC18.34■□□□□ 0.53
Rfc4Q99J62 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.34■□□□□ 0.53
Rfc4Q99J62 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.34■□□□□ 0.53
Rfc4Q99J62 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfc4Q99J62 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.33■□□□□ 0.53
Rfc4Q99J62 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfc4Q99J62 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rfc4Q99J62 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfc4Q99J62 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rfc4Q99J62 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfc4Q99J62 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfc4Q99J62 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Gm17271-201ENSMUST00000165535 355 ntBASIC18.33■□□□□ 0.52
Rfc4Q99J62 Gm37153-201ENSMUST00000193637 231 ntBASIC18.33■□□□□ 0.52
Rfc4Q99J62 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.33■□□□□ 0.52
Rfc4Q99J62 Gm45167-201ENSMUST00000208007 322 ntBASIC18.33■□□□□ 0.52
Rfc4Q99J62 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfc4Q99J62 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms