Protein–RNA interactions for Protein: Q99J10

Ctu1, Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1Q99J10 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctu1Q99J10 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Mir1895-201ENSMUST00000122615 79 ntBASIC17.65■□□□□ 0.42
Ctu1Q99J10 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Mir6956-201ENSMUST00000183598 62 ntBASIC17.65■□□□□ 0.42
Ctu1Q99J10 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.65■□□□□ 0.42
Ctu1Q99J10 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.65■□□□□ 0.42
Ctu1Q99J10 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.65■□□□□ 0.42
Ctu1Q99J10 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.65■□□□□ 0.42
Ctu1Q99J10 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctu1Q99J10 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ctu1Q99J10 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ctu1Q99J10 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ctu1Q99J10 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.64■□□□□ 0.41
Ctu1Q99J10 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm6257-201ENSMUST00000163864 910 ntBASIC17.64■□□□□ 0.41
Ctu1Q99J10 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm5177-201ENSMUST00000183092 997 ntBASIC17.64■□□□□ 0.41
Ctu1Q99J10 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.64■□□□□ 0.41
Ctu1Q99J10 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm44872-201ENSMUST00000207864 420 ntBASIC17.64■□□□□ 0.41
Ctu1Q99J10 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ctu1Q99J10 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.64■□□□□ 0.41
Ctu1Q99J10 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.64■□□□□ 0.41
Ctu1Q99J10 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.63■□□□□ 0.41
Ctu1Q99J10 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Gm13616-201ENSMUST00000120600 222 ntBASIC17.63■□□□□ 0.41
Ctu1Q99J10 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.63■□□□□ 0.41
Ctu1Q99J10 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.63■□□□□ 0.41
Ctu1Q99J10 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ctu1Q99J10 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ctu1Q99J10 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctu1Q99J10 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctu1Q99J10 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctu1Q99J10 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Ctu1Q99J10 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ctu1Q99J10 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Ctu1Q99J10 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ctu1Q99J10 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms