Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdha9Q91Y11 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdha9Q91Y11 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdha9Q91Y11 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
Pcdha9Q91Y11 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Pcdha9Q91Y11 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Gm12644-201ENSMUST00000119935 606 ntBASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha9Q91Y11 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms