Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Gm15171-201ENSMUST00000122191 334 ntBASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Gm27867-201ENSMUST00000184778 125 ntBASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhb20Q91XZ9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb20Q91XZ9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.46■□□□□ 0.06
Pcdhb20Q91XZ9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhb20Q91XZ9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhb20Q91XZ9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Pcdhb20Q91XZ9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhb20Q91XZ9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Gm43244-201ENSMUST00000196994 1285 ntBASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 AC154252.1-201ENSMUST00000226041 473 ntBASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb20Q91XZ9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Gm8872-201ENSMUST00000197475 1341 ntBASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms