Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga3Q91XY5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Gm9013-201ENSMUST00000132939 882 ntBASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga3Q91XY5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga3Q91XY5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms