Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx41Q91VN6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Gm27867-201ENSMUST00000184778 125 ntBASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx41Q91VN6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Gm15165-201ENSMUST00000118140 502 ntBASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx41Q91VN6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx41Q91VN6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx41Q91VN6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Ddx41Q91VN6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx41Q91VN6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx41Q91VN6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.27■□□□□ 0.51
Ddx41Q91VN6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ddx41Q91VN6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx41Q91VN6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms