Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.78□□□□□ -0.2
Tram1Q91V04 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.78□□□□□ -0.2
Tram1Q91V04 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tram1Q91V04 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tram1Q91V04 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tram1Q91V04 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tram1Q91V04 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tram1Q91V04 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tram1Q91V04 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Tram1Q91V04 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Tram1Q91V04 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tram1Q91V04 Gm43183-201ENSMUST00000200632 547 ntBASIC13.77□□□□□ -0.21
Tram1Q91V04 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tram1Q91V04 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Tram1Q91V04 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.76□□□□□ -0.21
Tram1Q91V04 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.76□□□□□ -0.21
Tram1Q91V04 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.76□□□□□ -0.21
Tram1Q91V04 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.76□□□□□ -0.21
Tram1Q91V04 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.76□□□□□ -0.21
Tram1Q91V04 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.76□□□□□ -0.21
Tram1Q91V04 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.76□□□□□ -0.21
Tram1Q91V04 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.76□□□□□ -0.21
Tram1Q91V04 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tram1Q91V04 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tram1Q91V04 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.76□□□□□ -0.21
Tram1Q91V04 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tram1Q91V04 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tram1Q91V04 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tram1Q91V04 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Tram1Q91V04 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tram1Q91V04 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tram1Q91V04 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tram1Q91V04 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Tram1Q91V04 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tram1Q91V04 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms