Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gm8825-201ENSMUST00000182565 998 ntBASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gm27306-201ENSMUST00000183970 107 ntBASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cspg4Q8VHY0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm9794-201ENSMUST00000202370 423 ntBASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm44719-201ENSMUST00000206404 149 ntBASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm6007-201ENSMUST00000208170 823 ntBASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm45612-201ENSMUST00000211320 160 ntBASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Gm7787-201ENSMUST00000216858 688 ntBASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cspg4Q8VHY0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm4518-201ENSMUST00000182638 718 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm43474-201ENSMUST00000196415 774 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm18622-201ENSMUST00000219361 595 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.66□□□□□ -0.22
Cspg4Q8VHY0 Mir6990-201ENSMUST00000183724 91 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gm18062-201ENSMUST00000208020 547 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gm18055-201ENSMUST00000208254 547 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms