Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rab40cQ8VHQ4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rab40cQ8VHQ4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Rab40cQ8VHQ4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
Rab40cQ8VHQ4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rab40cQ8VHQ4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rab40cQ8VHQ4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Gm13186-201ENSMUST00000118031 316 ntBASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Gm10653-202ENSMUST00000139570 835 ntBASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rab40cQ8VHQ4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Gm36967-201ENSMUST00000193814 266 ntBASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Gm18115-201ENSMUST00000221209 621 ntBASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Rab40cQ8VHQ4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rab40cQ8VHQ4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms