Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Sybu-209ENSMUST00000228639 4113 ntBASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpa1Q8VEE4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Gm10653-202ENSMUST00000139570 835 ntBASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpa1Q8VEE4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpa1Q8VEE4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Gm8520-201ENSMUST00000186517 868 ntBASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Gm37444-201ENSMUST00000193605 439 ntBASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpa1Q8VEE4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpa1Q8VEE4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms