Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Dnajc28Q8VCE1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Gm7506-201ENSMUST00000207758 815 ntBASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Dnajc28Q8VCE1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dnajc28Q8VCE1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Dnajc28Q8VCE1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Dnajc28Q8VCE1 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.39■□□□□ 0.38
Dnajc28Q8VCE1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.39■□□□□ 0.37
Dnajc28Q8VCE1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms