Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpap2Q8VC34 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Gm15165-201ENSMUST00000118140 502 ntBASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rpap2Q8VC34 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpap2Q8VC34 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpap2Q8VC34 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpap2Q8VC34 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpap2Q8VC34 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpap2Q8VC34 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpap2Q8VC34 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpap2Q8VC34 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Gm12895-201ENSMUST00000122214 226 ntBASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Gm6257-201ENSMUST00000163864 910 ntBASIC17.51■□□□□ 0.39
Rpap2Q8VC34 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Gm18669-201ENSMUST00000216049 778 ntBASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpap2Q8VC34 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpap2Q8VC34 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.49■□□□□ 0.39
Rpap2Q8VC34 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpap2Q8VC34 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.48■□□□□ 0.39
Rpap2Q8VC34 Dancr-204ENSMUST00000132389 2347 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms