Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Nup35Q8R4R6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Gm18421-201ENSMUST00000204122 625 ntBASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup35Q8R4R6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Mir1199-201ENSMUST00000117015 119 ntBASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Gm11539-201ENSMUST00000119837 557 ntBASIC13.04□□□□□ -0.32
Nup35Q8R4R6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup35Q8R4R6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms