Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp2a1Q8R429 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.8■□□□□ 0.44
Atp2a1Q8R429 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 AV026068-213ENSMUST00000223675 1171 ntBASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp2a1Q8R429 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Gm15173-201ENSMUST00000122049 433 ntBASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp2a1Q8R429 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp2a1Q8R429 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp2a1Q8R429 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp2a1Q8R429 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Atp2a1Q8R429 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.77■□□□□ 0.44
Atp2a1Q8R429 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Atp2a1Q8R429 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms