Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Gm36967-201ENSMUST00000193814 266 ntBASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Gm44450-201ENSMUST00000199528 114 ntBASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nudcd3Q8R1N4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nudcd3Q8R1N4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Nudcd3Q8R1N4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Gm11539-201ENSMUST00000119837 557 ntBASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Odf3b-204ENSMUST00000227834 930 ntBASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Nudcd3Q8R1N4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms