Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cchcr1Q8K2I2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cchcr1Q8K2I2 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.92■□□□□ 0.62
Cchcr1Q8K2I2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cchcr1Q8K2I2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cchcr1Q8K2I2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cchcr1Q8K2I2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cchcr1Q8K2I2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cchcr1Q8K2I2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cchcr1Q8K2I2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.89■□□□□ 0.62
Cchcr1Q8K2I2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cchcr1Q8K2I2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cchcr1Q8K2I2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cchcr1Q8K2I2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cchcr1Q8K2I2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Mir770-201ENSMUST00000103252 94 ntBASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Cchcr1Q8K2I2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms