Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Gm18101-201ENSMUST00000215769 548 ntBASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Gm9987-201ENSMUST00000069768 567 ntBASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcs1Q8JZK9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Gm11355-201ENSMUST00000121120 306 ntBASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcs1Q8JZK9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgcs1Q8JZK9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgcs1Q8JZK9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgcs1Q8JZK9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgcs1Q8JZK9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgcs1Q8JZK9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgcs1Q8JZK9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgcs1Q8JZK9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgcs1Q8JZK9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms