Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.64■□□□□ 0.73
Smc4Q8CG47 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.64■□□□□ 0.73
Smc4Q8CG47 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc4Q8CG47 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.63■□□□□ 0.73
Smc4Q8CG47 Gm12350-201ENSMUST00000121208 462 ntBASIC19.63■□□□□ 0.73
Smc4Q8CG47 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc4Q8CG47 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Gm7222-201ENSMUST00000117512 906 ntBASIC19.62■□□□□ 0.73
Smc4Q8CG47 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.62■□□□□ 0.73
Smc4Q8CG47 Gm6257-201ENSMUST00000163864 910 ntBASIC19.62■□□□□ 0.73
Smc4Q8CG47 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Mir5126-201ENSMUST00000175513 77 ntBASIC19.62■□□□□ 0.73
Smc4Q8CG47 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc4Q8CG47 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Gm6550-201ENSMUST00000187574 993 ntBASIC19.61■□□□□ 0.73
Smc4Q8CG47 Gm18206-201ENSMUST00000207027 926 ntBASIC19.61■□□□□ 0.73
Smc4Q8CG47 AV026068-213ENSMUST00000223675 1171 ntBASIC19.61■□□□□ 0.73
Smc4Q8CG47 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc4Q8CG47 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smc4Q8CG47 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Gm8344-201ENSMUST00000119813 856 ntBASIC19.59■□□□□ 0.73
Smc4Q8CG47 Gm1401-201ENSMUST00000122048 772 ntBASIC19.59■□□□□ 0.73
Smc4Q8CG47 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms