Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smim4Q8C1Q6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smim4Q8C1Q6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smim4Q8C1Q6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smim4Q8C1Q6 Gm7889-201ENSMUST00000185591 958 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms