Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44357-201ENSMUST00000195897 142 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm19658-201ENSMUST00000196231 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44367-201ENSMUST00000196836 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44350-201ENSMUST00000197197 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44390-201ENSMUST00000197533 144 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44313-201ENSMUST00000198018 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44486-201ENSMUST00000198508 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44314-201ENSMUST00000199263 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44394-201ENSMUST00000199558 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44484-201ENSMUST00000199873 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44466-201ENSMUST00000200264 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm44359-201ENSMUST00000200671 138 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm5864-201ENSMUST00000202263 970 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nup54Q8BTS4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Gm6257-201ENSMUST00000163864 910 ntBASIC16.32■□□□□ 0.2
Nup54Q8BTS4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Gm6296-201ENSMUST00000222599 943 ntBASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nup54Q8BTS4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Mir8098-201ENSMUST00000184011 137 ntBASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Gm28659-201ENSMUST00000188013 759 ntBASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nup54Q8BTS4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nup54Q8BTS4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms