Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim23Q8BGX0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trim23Q8BGX0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.39■□□□□ 0.05
Trim23Q8BGX0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Gm7506-201ENSMUST00000207758 815 ntBASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim23Q8BGX0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Gm12497-201ENSMUST00000138778 237 ntBASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim23Q8BGX0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim23Q8BGX0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Gm4459-201ENSMUST00000118750 468 ntBASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim23Q8BGX0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms