Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Gm11950-201ENSMUST00000121615 838 ntBASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Gm18115-201ENSMUST00000221209 621 ntBASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.75■□□□□ 0.59
Samm50Q8BGH2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Samm50Q8BGH2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Samm50Q8BGH2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Gm27704-201ENSMUST00000185094 107 ntBASIC18.72■□□□□ 0.59
Samm50Q8BGH2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Samm50Q8BGH2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Samm50Q8BGH2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms