Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.15■□□□□ 0.02
Krr1Q8BGA5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Gm13186-201ENSMUST00000118031 316 ntBASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Gm16061-201ENSMUST00000122167 857 ntBASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Krr1Q8BGA5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Krr1Q8BGA5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Gm13474-201ENSMUST00000122466 815 ntBASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.12■□□□□ 0.01
Krr1Q8BGA5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Phf7-203ENSMUST00000226565 1971 ntBASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Krr1Q8BGA5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms