Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shank2Q80Z38 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.48■□□□□ 0.87
Shank2Q80Z38 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank2Q80Z38 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Shank2Q80Z38 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Gm27618-201ENSMUST00000183671 60 ntBASIC20.47■□□□□ 0.87
Shank2Q80Z38 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Gm5779-201ENSMUST00000218467 910 ntBASIC20.47■□□□□ 0.87
Shank2Q80Z38 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Shank2Q80Z38 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.46■□□□□ 0.87
Shank2Q80Z38 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank2Q80Z38 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.45■□□□□ 0.86
Shank2Q80Z38 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.45■□□□□ 0.86
Shank2Q80Z38 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.45■□□□□ 0.86
Shank2Q80Z38 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Shank2Q80Z38 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Mir7684-201ENSMUST00000183858 60 ntBASIC20.44■□□□□ 0.86
Shank2Q80Z38 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.44■□□□□ 0.86
Shank2Q80Z38 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.44■□□□□ 0.86
Shank2Q80Z38 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank2Q80Z38 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Gm38294-201ENSMUST00000192831 381 ntBASIC20.43■□□□□ 0.86
Shank2Q80Z38 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank2Q80Z38 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms